Human LTR-retrotransposon TFBS information

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Please choose TFBS: select TFBSAP-2alpha / 1154AP-2gamma / 1750ATF3 / 676BAF155 / 424BAF170 / 105BATF / 2943BCL11A / 1857BCL3 / 814BCLAF1_(M33-P5B11) / 294BDP1 / 46BHLHE40 / 237BRCA1_(C-1863) / 244BRF1 / 7BRF2 / 112Brg1 / 332c-Fos / 6019c-Jun / 5332c-Myc / 2382CCNT2 / 1193CEBPB / 9580CHD2_(N-1250) / 1363CtBP2 / 99CTCF / 16446CTCFL_(SC-98982) / 942CTCF_(C-20) / 3729CTCF_(SC-5916) / 5879E2F1 / 28E2F4 / 108E2F6 / 612E2F6_(H-50) / 1669EBF / 3054EBF1_(C-8) / 2755eGFP-FOS / 1005eGFP-GATA2 / 1602eGFP-HDAC8 / 82eGFP-JunB / 1378eGFP-JunD / 2879eGFP-NR4A1 / 40Egr-1 / 2055ELF1_(SC-631) / 3338ELK4 / 224ERalpha_a / 2637ERRA / 47ETS1 / 362FOSL1_(SC-183) / 1042FOSL2 / 1989FOXA1_(C-20) / 7059FOXA1_(SC-101058) / 3643FOXA2_(SC-6554) / 3371GABP / 1371GATA-1 / 4072GATA-2 / 7539GATA2_(CG2-96) / 2649GATA3_(SC-268) / 3493GCN5 / 4GR / 2342GRp20 / 2GTF2B / 174GTF2F1_(RAP-74) / 591HA-E2F1 / 825HDAC2_(SC-6296) / 2171HEY1 / 2102HMGN3 / 381HNF4A / 716HNF4A_(H-171) / 2530HNF4G_(SC-6558) / 1744HSF1 / 57Ini1 / 281IRF1 / 822IRF3 / 83IRF4_(M-17) / 1548JunD / 5891KAP1 / 6072MafF_(M8194) / 3357MafK_(ab50322) / 7117MafK_(SC-477) / 3758Max / 3260MEF2A / 1338MEF2C_(SC-13268) / 504Mxi1_(bHLH) / 602NANOG_(SC-33759) / 1538NELFe / 24NF-E2 / 255NF-E2_(H-230) / 121NF-YA / 4712NF-YB / 4475NFKB / 3382Nrf1 / 145NRSF / 2460Oct-2 / 1302p300 / 6874p300_(F-4) / 490p300_(N-15) / 2104PAX5-C20 / 1839PAX5-N19 / 1327Pbx3 / 620PGC1A / 38Pol2 / 6936Pol2(b) / 1163Pol2(phosphoS2) / 245Pol2-4H8 / 5620Pol3 / 1POU2F2 / 1299POU5F1_(SC-9081) / 857PRDM1_(Val90) / 397PU.1 / 8228Rad21 / 8628RFX5_(N-494) / 1338RPC155 / 279RXRA / 1518SETDB1 / 9606Sin3Ak-20 / 589SIRT6 / 340SIX5 / 976SMC3_(ab9263) / 3412SP1 / 4207SP2_(SC-643) / 124SPT20 / 13SREBP1 / 91SREBP2 / 21SRF / 2713STAT1 / 2172STAT2 / 433STAT3 / 7221SUZ12 / 94TAF1 / 2050TAF7_(SQ-8) / 565TAL1_(SC-12984) / 4758TBP / 3380TCF12 / 2192TCF4 / 2583TFIIIC-110 / 170THAP1_(SC-98174) / 62TR4 / 187USF-1 / 11993USF1_(SC-8983) / 3934USF2 / 4077WHIP / 53XRCC4 / 1YY1 / 3555YY1_(C-20) / 3940ZBTB33 / 680ZBTB7A_(SC-34508) / 707ZEB1_(SC-25388) / 322Znf143_(16618-1-AP) / 1152ZNF263 / 2025ZNF274 / 205ZZZ3 / 157

or

Divergence Range	TFBS in range
140	281
160	373
240	674
180	421
280	622
300	522
100	136
120	201
60	29
200	510
260	619
220	628
80	102

* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.

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