Human LTR-retrotransposon TFBS information

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Please choose TFBS: select TFBSAP-2alpha / 1154AP-2gamma / 1750ATF3 / 676BAF155 / 424BAF170 / 105BATF / 2943BCL11A / 1857BCL3 / 814BCLAF1_(M33-P5B11) / 294BDP1 / 46BHLHE40 / 237BRCA1_(C-1863) / 244BRF1 / 7BRF2 / 112Brg1 / 332c-Fos / 6019c-Jun / 5332c-Myc / 2382CCNT2 / 1193CEBPB / 9580CHD2_(N-1250) / 1363CtBP2 / 99CTCF / 16446CTCFL_(SC-98982) / 942CTCF_(C-20) / 3729CTCF_(SC-5916) / 5879E2F1 / 28E2F4 / 108E2F6 / 612E2F6_(H-50) / 1669EBF / 3054EBF1_(C-8) / 2755eGFP-FOS / 1005eGFP-GATA2 / 1602eGFP-HDAC8 / 82eGFP-JunB / 1378eGFP-JunD / 2879eGFP-NR4A1 / 40Egr-1 / 2055ELF1_(SC-631) / 3338ELK4 / 224ERalpha_a / 2637ERRA / 47ETS1 / 362FOSL1_(SC-183) / 1042FOSL2 / 1989FOXA1_(C-20) / 7059FOXA1_(SC-101058) / 3643FOXA2_(SC-6554) / 3371GABP / 1371GATA-1 / 4072GATA-2 / 7539GATA2_(CG2-96) / 2649GATA3_(SC-268) / 3493GCN5 / 4GR / 2342GRp20 / 2GTF2B / 174GTF2F1_(RAP-74) / 591HA-E2F1 / 825HDAC2_(SC-6296) / 2171HEY1 / 2102HMGN3 / 381HNF4A / 716HNF4A_(H-171) / 2530HNF4G_(SC-6558) / 1744HSF1 / 57Ini1 / 281IRF1 / 822IRF3 / 83IRF4_(M-17) / 1548JunD / 5891KAP1 / 6072MafF_(M8194) / 3357MafK_(ab50322) / 7117MafK_(SC-477) / 3758Max / 3260MEF2A / 1338MEF2C_(SC-13268) / 504Mxi1_(bHLH) / 602NANOG_(SC-33759) / 1538NELFe / 24NF-E2 / 255NF-E2_(H-230) / 121NF-YA / 4712NF-YB / 4475NFKB / 3382Nrf1 / 145NRSF / 2460Oct-2 / 1302p300 / 6874p300_(F-4) / 490p300_(N-15) / 2104PAX5-C20 / 1839PAX5-N19 / 1327Pbx3 / 620PGC1A / 38Pol2 / 6936Pol2(b) / 1163Pol2(phosphoS2) / 245Pol2-4H8 / 5620Pol3 / 1POU2F2 / 1299POU5F1_(SC-9081) / 857PRDM1_(Val90) / 397PU.1 / 8228Rad21 / 8628RFX5_(N-494) / 1338RPC155 / 279RXRA / 1518SETDB1 / 9606Sin3Ak-20 / 589SIRT6 / 340SIX5 / 976SMC3_(ab9263) / 3412SP1 / 4207SP2_(SC-643) / 124SPT20 / 13SREBP1 / 91SREBP2 / 21SRF / 2713STAT1 / 2172STAT2 / 433STAT3 / 7221SUZ12 / 94TAF1 / 2050TAF7_(SQ-8) / 565TAL1_(SC-12984) / 4758TBP / 3380TCF12 / 2192TCF4 / 2583TFIIIC-110 / 170THAP1_(SC-98174) / 62TR4 / 187USF-1 / 11993USF1_(SC-8983) / 3934USF2 / 4077WHIP / 53XRCC4 / 1YY1 / 3555YY1_(C-20) / 3940ZBTB33 / 680ZBTB7A_(SC-34508) / 707ZEB1_(SC-25388) / 322Znf143_(16618-1-AP) / 1152ZNF263 / 2025ZNF274 / 205ZZZ3 / 157

or

Divergence Range	TFBS in range
220	356
200	344
60	68
300	242
160	379
260	327
180	375
100	225
240	356
140	335
120	316
280	274
80	150

* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.

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