Human LTR-retrotransposon TFBS information
Please choose TFBS:
select TFBS AP-2alpha / 1154 AP-2gamma / 1750 ATF3 / 676 BAF155 / 424 BAF170 / 105 BATF / 2943 BCL11A / 1857 BCL3 / 814 BCLAF1_(M33-P5B11) / 294 BDP1 / 46 BHLHE40 / 237 BRCA1_(C-1863) / 244 BRF1 / 7 BRF2 / 112 Brg1 / 332 c-Fos / 6019 c-Jun / 5332 c-Myc / 2382 CCNT2 / 1193 CEBPB / 9580 CHD2_(N-1250) / 1363 CtBP2 / 99 CTCF / 16446 CTCFL_(SC-98982) / 942 CTCF_(C-20) / 3729 CTCF_(SC-5916) / 5879 E2F1 / 28 E2F4 / 108 E2F6 / 612 E2F6_(H-50) / 1669 EBF / 3054 EBF1_(C-8) / 2755 eGFP-FOS / 1005 eGFP-GATA2 / 1602 eGFP-HDAC8 / 82 eGFP-JunB / 1378 eGFP-JunD / 2879 eGFP-NR4A1 / 40 Egr-1 / 2055 ELF1_(SC-631) / 3338 ELK4 / 224 ERalpha_a / 2637 ERRA / 47 ETS1 / 362 FOSL1_(SC-183) / 1042 FOSL2 / 1989 FOXA1_(C-20) / 7059 FOXA1_(SC-101058) / 3643 FOXA2_(SC-6554) / 3371 GABP / 1371 GATA-1 / 4072 GATA-2 / 7539 GATA2_(CG2-96) / 2649 GATA3_(SC-268) / 3493 GCN5 / 4 GR / 2342 GRp20 / 2 GTF2B / 174 GTF2F1_(RAP-74) / 591 HA-E2F1 / 825 HDAC2_(SC-6296) / 2171 HEY1 / 2102 HMGN3 / 381 HNF4A / 716 HNF4A_(H-171) / 2530 HNF4G_(SC-6558) / 1744 HSF1 / 57 Ini1 / 281 IRF1 / 822 IRF3 / 83 IRF4_(M-17) / 1548 JunD / 5891 KAP1 / 6072 MafF_(M8194) / 3357 MafK_(ab50322) / 7117 MafK_(SC-477) / 3758 Max / 3260 MEF2A / 1338 MEF2C_(SC-13268) / 504 Mxi1_(bHLH) / 602 NANOG_(SC-33759) / 1538 NELFe / 24 NF-E2 / 255 NF-E2_(H-230) / 121 NF-YA / 4712 NF-YB / 4475 NFKB / 3382 Nrf1 / 145 NRSF / 2460 Oct-2 / 1302 p300 / 6874 p300_(F-4) / 490 p300_(N-15) / 2104 PAX5-C20 / 1839 PAX5-N19 / 1327 Pbx3 / 620 PGC1A / 38 Pol2 / 6936 Pol2(b) / 1163 Pol2(phosphoS2) / 245 Pol2-4H8 / 5620 Pol3 / 1 POU2F2 / 1299 POU5F1_(SC-9081) / 857 PRDM1_(Val90) / 397 PU.1 / 8228 Rad21 / 8628 RFX5_(N-494) / 1338 RPC155 / 279 RXRA / 1518 SETDB1 / 9606 Sin3Ak-20 / 589 SIRT6 / 340 SIX5 / 976 SMC3_(ab9263) / 3412 SP1 / 4207 SP2_(SC-643) / 124 SPT20 / 13 SREBP1 / 91 SREBP2 / 21 SRF / 2713 STAT1 / 2172 STAT2 / 433 STAT3 / 7221 SUZ12 / 94 TAF1 / 2050 TAF7_(SQ-8) / 565 TAL1_(SC-12984) / 4758 TBP / 3380 TCF12 / 2192 TCF4 / 2583 TFIIIC-110 / 170 THAP1_(SC-98174) / 62 TR4 / 187 USF-1 / 11993 USF1_(SC-8983) / 3934 USF2 / 4077 WHIP / 53 XRCC4 / 1 YY1 / 3555 YY1_(C-20) / 3940 ZBTB33 / 680 ZBTB7A_(SC-34508) / 707 ZEB1_(SC-25388) / 322 Znf143_(16618-1-AP) / 1152 ZNF263 / 2025 ZNF274 / 205 ZZZ3 / 157
or
Approximation index (TFBS_norma_1) = 2.82 Approximation index (TFBS_norma_2) = 0.89
Divergence Range TFBS in range 160 109 240 154 280 135 180 110 120 55 140 85 220 140 260 148 300 120 80 14 200 131 100 31
* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.
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