Human LTR-retrotransposon TFBS information

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Please choose TFBS: select TFBSAP-2alpha / 1154AP-2gamma / 1750ATF3 / 676BAF155 / 424BAF170 / 105BATF / 2943BCL11A / 1857BCL3 / 814BCLAF1_(M33-P5B11) / 294BDP1 / 46BHLHE40 / 237BRCA1_(C-1863) / 244BRF1 / 7BRF2 / 112Brg1 / 332c-Fos / 6019c-Jun / 5332c-Myc / 2382CCNT2 / 1193CEBPB / 9580CHD2_(N-1250) / 1363CtBP2 / 99CTCF / 16446CTCFL_(SC-98982) / 942CTCF_(C-20) / 3729CTCF_(SC-5916) / 5879E2F1 / 28E2F4 / 108E2F6 / 612E2F6_(H-50) / 1669EBF / 3054EBF1_(C-8) / 2755eGFP-FOS / 1005eGFP-GATA2 / 1602eGFP-HDAC8 / 82eGFP-JunB / 1378eGFP-JunD / 2879eGFP-NR4A1 / 40Egr-1 / 2055ELF1_(SC-631) / 3338ELK4 / 224ERalpha_a / 2637ERRA / 47ETS1 / 362FOSL1_(SC-183) / 1042FOSL2 / 1989FOXA1_(C-20) / 7059FOXA1_(SC-101058) / 3643FOXA2_(SC-6554) / 3371GABP / 1371GATA-1 / 4072GATA-2 / 7539GATA2_(CG2-96) / 2649GATA3_(SC-268) / 3493GCN5 / 4GR / 2342GRp20 / 2GTF2B / 174GTF2F1_(RAP-74) / 591HA-E2F1 / 825HDAC2_(SC-6296) / 2171HEY1 / 2102HMGN3 / 381HNF4A / 716HNF4A_(H-171) / 2530HNF4G_(SC-6558) / 1744HSF1 / 57Ini1 / 281IRF1 / 822IRF3 / 83IRF4_(M-17) / 1548JunD / 5891KAP1 / 6072MafF_(M8194) / 3357MafK_(ab50322) / 7117MafK_(SC-477) / 3758Max / 3260MEF2A / 1338MEF2C_(SC-13268) / 504Mxi1_(bHLH) / 602NANOG_(SC-33759) / 1538NELFe / 24NF-E2 / 255NF-E2_(H-230) / 121NF-YA / 4712NF-YB / 4475NFKB / 3382Nrf1 / 145NRSF / 2460Oct-2 / 1302p300 / 6874p300_(F-4) / 490p300_(N-15) / 2104PAX5-C20 / 1839PAX5-N19 / 1327Pbx3 / 620PGC1A / 38Pol2 / 6936Pol2(b) / 1163Pol2(phosphoS2) / 245Pol2-4H8 / 5620Pol3 / 1POU2F2 / 1299POU5F1_(SC-9081) / 857PRDM1_(Val90) / 397PU.1 / 8228Rad21 / 8628RFX5_(N-494) / 1338RPC155 / 279RXRA / 1518SETDB1 / 9606Sin3Ak-20 / 589SIRT6 / 340SIX5 / 976SMC3_(ab9263) / 3412SP1 / 4207SP2_(SC-643) / 124SPT20 / 13SREBP1 / 91SREBP2 / 21SRF / 2713STAT1 / 2172STAT2 / 433STAT3 / 7221SUZ12 / 94TAF1 / 2050TAF7_(SQ-8) / 565TAL1_(SC-12984) / 4758TBP / 3380TCF12 / 2192TCF4 / 2583TFIIIC-110 / 170THAP1_(SC-98174) / 62TR4 / 187USF-1 / 11993USF1_(SC-8983) / 3934USF2 / 4077WHIP / 53XRCC4 / 1YY1 / 3555YY1_(C-20) / 3940ZBTB33 / 680ZBTB7A_(SC-34508) / 707ZEB1_(SC-25388) / 322Znf143_(16618-1-AP) / 1152ZNF263 / 2025ZNF274 / 205ZZZ3 / 157

or

Divergence Range	TFBS in range
240	554
280	549
300	474
100	147
120	207
140	306
60	28
160	394
180	407
200	444
220	539
80	103
260	532

* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.

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