HERV genome browser

31156328

249250622

Insertions

LTR18A 118357967-118358284 | TFBS: 0 | Strand: -

LTR18A 118357967-118358284 BLAT view
TFBS: 0 Strand: - Mutations: 272
0

LTR18A 64652289-64652626 | TFBS: 0 | Strand: +

LTR18A 64652289-64652626 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR18A 64658106-64658445 | TFBS: 2 | Strand: +

LTR18A 64658106-64658445 BLAT view
TFBS: 2 Strand: + Mutations: 130
KAP1/64657927/64658377/784
SETDB1/64657998/64658448/363

LTR18A 66847749-66847890 | TFBS: 0 | Strand: +

LTR18A 66847749-66847890 BLAT view
TFBS: 0 Strand: + Mutations: 121
0

LTR18A 66849001-66849375 | TFBS: 6 | Strand: +

LTR18A 66849001-66849375 BLAT view
TFBS: 6 Strand: + Mutations: 165
KAP1/66848822/66849487/1000
SETDB1/66848823/66849273/507
MafF_(M8194)/66848925/66849195/330
MafK_(SC-477)/66848939/66849183/514
NF-E2/66848962/66849166/290
MafK_(ab50322)/66849017/66849146/524

LTR18A 71093640-71094038 | TFBS: 3 | Strand: +

LTR18A 71093640-71094038 BLAT view
TFBS: 3 Strand: + Mutations: 148
KAP1/71093524/71093974/397
SETDB1/71093594/71093914/385
CEBPB/71093644/71093888/90

LTR18A 71096558-71096968 | TFBS: 0 | Strand: +

LTR18A 71096558-71096968 BLAT view
TFBS: 0 Strand: + Mutations: 169
0

LTR18A 80515902-80516259 | TFBS: 0 | Strand: +

LTR18A 80515902-80516259 BLAT view
TFBS: 0 Strand: + Mutations: 114
0

LTR18A 80519922-80520273 | TFBS: 5 | Strand: +

LTR18A 80519922-80520273 BLAT view
TFBS: 5 Strand: + Mutations: 146
AP-2gamma/80519774/80520144/239
KAP1/80519782/80520236/1000
FOXA1_(C-20)/80519949/80520149/195
STAT3/80519952/80520196/190
Pol2/80520028/80520338/88

LTR18A 86875032-86875345 | TFBS: 5 | Strand: -

LTR18A 86875032-86875345 BLAT view
TFBS: 5 Strand: - Mutations: 112
KAP1/86875029/86875479/704
YY1/86875228/86875432/64
USF1_(SC-8983)/86875253/86875473/82
USF2/86875258/86875504/180
USF-1/86875283/86875482/960

LTR18A 86882024-86882363 | TFBS: 0 | Strand: -

LTR18A 86882024-86882363 BLAT view
TFBS: 0 Strand: - Mutations: 113
0

LTR18A 117918872-117919214 | TFBS: 0 | Strand: +

LTR18A 117918872-117919214 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR18A 118364313-118364632 | TFBS: 30 | Strand: -

LTR18A 118364313-118364632 BLAT view
TFBS: 30 Strand: - Mutations: 274
SETDB1/118364310/118364767/654
KAP1/118364323/118364776/842
GATA-2/118364350/118364712/1000
TBP/118364355/118364655/48
GTF2F1_(RAP-74)/118364378/118364674/591
RFX5_(N-494)/118364403/118364659/58
p300/118364405/118364689/383
eGFP-JunD/118364414/118364710/371
FOXA1_(C-20)/118364416/118364676/198
STAT3/118364421/118364711/555
Max/118364426/118364690/611
MafK_(ab50322)/118364434/118364698/505
c-Myc/118364436/118364696/527
Mxi1_(bHLH)/118364443/118364693/464
SMC3_(ab9263)/118364452/118364688/152
c-Fos/118364455/118364685/1000
Rad21/118364457/118364677/97
FOXA2_(SC-6554)/118364458/118364682/166
c-Jun/118364460/118364664/1000
JunD/118364463/118364723/831
NF-E2/118364471/118364675/321
YY1_(C-20)/118364476/118364740/82
STAT1/118364483/118364843/141
p300_(N-15)/118364492/118364627/1000
FOXA1_(SC-101058)/118364495/118364568/356
YY1/118364506/118364710/125
MafF_(M8194)/118364509/118364647/510
CEBPB/118364515/118364589/274
MafK_(SC-477)/118364521/118364626/963
FOSL2/118364540/118364600/473

LTR18A 162897338-162897655 | TFBS: 0 | Strand: +

LTR18A 162897338-162897655 BLAT view
TFBS: 0 Strand: + Mutations: 257
0

LTR18A 168233478-168233803 | TFBS: 0 | Strand: -

LTR18A 168233478-168233803 BLAT view
TFBS: 0 Strand: - Mutations: 243
0

LTR18A 168239841-168240170 | TFBS: 0 | Strand: -

LTR18A 168239841-168240170 BLAT view
TFBS: 0 Strand: - Mutations: 225
0

LTR18A 184256207-184256606 | TFBS: 3 | Strand: +

LTR18A 184256207-184256606 BLAT view
TFBS: 3 Strand: + Mutations: 144
SETDB1/184256073/184256523/433
KAP1/184256121/184256571/1000
CEBPB/184256207/184256451/98

LTR18A 184259387-184259752 | TFBS: 6 | Strand: +

LTR18A 184259387-184259752 BLAT view
TFBS: 6 Strand: + Mutations: 153
KAP1/184259238/184259891/1000
STAT3/184259314/184259598/120
MafK_(SC-477)/184259334/184259578/267
MafK_(ab50322)/184259336/184259600/224
NF-E2/184259350/184259554/227
SETDB1/184259381/184259914/1000

LTR18A 187811863-187812200 | TFBS: 3 | Strand: -

LTR18A 187811863-187812200 BLAT view
TFBS: 3 Strand: - Mutations: 119
KAP1/187811771/187812221/845
SETDB1/187811896/187812346/274
STAT3/187811932/187812176/175

LTR18A 191578310-191578437 | TFBS: 0 | Strand: +

LTR18A 191578310-191578437 BLAT view
TFBS: 0 Strand: + Mutations: 224
0

LTR18A 196504740-196505114 | TFBS: 3 | Strand: -

LTR18A 196504740-196505114 BLAT view
TFBS: 3 Strand: - Mutations: 189
KAP1/196504814/196505238/1000
SETDB1/196504824/196505274/1000
YY1/196504912/196505116/63

LTR18A 196507492-196507888 | TFBS: 5 | Strand: -

LTR18A 196507492-196507888 BLAT view
TFBS: 5 Strand: - Mutations: 152
SETDB1/196507493/196507985/467
KAP1/196507564/196508023/887
MafK_(SC-477)/196507691/196507935/592
MafK_(ab50322)/196507697/196507961/1000
MafF_(M8194)/196507747/196507894/582

LTR18A 199636157-199636523 | TFBS: 1 | Strand: -

LTR18A 199636157-199636523 BLAT view
TFBS: 1 Strand: - Mutations: 158
STAT3/199636298/199636582/105

TFBS+