HERV genome browser

31156328

249250622

Insertions

LTR10A 156368827-156369067 | TFBS: 0 | Strand: +

LTR10A 156368827-156369067 BLAT view
TFBS: 0 Strand: + Mutations: 145
0

LTR10A 1382301-1382488 | TFBS: 0 | Strand: -

LTR10A 1382301-1382488 BLAT view
TFBS: 0 Strand: - Mutations: 115
0

LTR10A 1405898-1406238 | TFBS: 1 | Strand: -

LTR10A 1405898-1406238 BLAT view
TFBS: 1 Strand: - Mutations: 158
Pol2/1406226/1406530/237

LTR10A 1406616-1406755 | TFBS: 1 | Strand: -

LTR10A 1406616-1406755 BLAT view
TFBS: 1 Strand: - Mutations: 158
HEY1/1406736/1406966/94

LTR10A 1434163-1434340 | TFBS: 0 | Strand: -

LTR10A 1434163-1434340 BLAT view
TFBS: 0 Strand: - Mutations: 118
0

LTR10A 1446277-1446784 | TFBS: 9 | Strand: -

LTR10A 1446277-1446784 BLAT view
TFBS: 9 Strand: - Mutations: 152
CTCF/1446303/1446659/75
Pol2-4H8/1446403/1446719/269
E2F4/1446411/1446671/265
HA-E2F1/1446439/1446814/550
USF-1/1446468/1446732/93
USF2/1446476/1446740/95
HEY1/1446481/1446721/79
E2F6_(H-50)/1446493/1446583/175
CCNT2/1446776/1447092/243

LTR10A 2029197-2029739 | TFBS: 2 | Strand: -

LTR10A 2029197-2029739 BLAT view
TFBS: 2 Strand: - Mutations: 167
SETDB1/2029020/2029431/816
FOSL2/2029431/2029667/362

LTR10A 26595322-26595896 | TFBS: 3 | Strand: +

LTR10A 26595322-26595896 BLAT view
TFBS: 3 Strand: + Mutations: 151
FOSL2/26595397/26595633/134
KAP1/26595584/26596034/893
SETDB1/26595629/26596079/501

LTR10A 30565417-30565624 | TFBS: 2 | Strand: -

LTR10A 30565417-30565624 BLAT view
TFBS: 2 Strand: - Mutations: 97
KAP1/30565267/30565719/651
SETDB1/30565281/30565701/1000

LTR10A 30565881-30566262 | TFBS: 0 | Strand: -

LTR10A 30565881-30566262 BLAT view
TFBS: 0 Strand: - Mutations: 147
0

LTR10A 31926361-31926948 | TFBS: 2 | Strand: -

LTR10A 31926361-31926948 BLAT view
TFBS: 2 Strand: - Mutations: 146
SETDB1/31926300/31926491/930
FOSL2/31926577/31926813/232

LTR10A 31944214-31944780 | TFBS: 23 | Strand: -

LTR10A 31944214-31944780 BLAT view
TFBS: 23 Strand: - Mutations: 151
HA-E2F1/31944260/31944710/196
eGFP-JunB/31944372/31944662/523
eGFP-FOS/31944393/31944643/305
c-Jun/31944402/31944740/1000
RXRA/31944404/31944664/269
CEBPB/31944412/31944669/164
p300/31944416/31944700/359
MafK_(ab50322)/31944422/31944686/152
JunD/31944432/31944722/282
c-Fos/31944443/31944702/359
Pol2-4H8/31944449/31944713/183
FOSL1_(SC-183)/31944452/31944668/204
USF-1/31944456/31944706/394
SIRT6/31944458/31944714/802
FOSL2/31944460/31944640/1000
GATA3_(SC-268)/31944481/31944741/352
GATA2_(CG2-96)/31944481/31944711/138
FOXA1_(C-20)/31944484/31944744/108
USF2/31944485/31944651/649
TAL1_(SC-12984)/31944488/31944738/231
FOXA1_(SC-101058)/31944492/31944762/160
eGFP-JunD/31944495/31944596/577
ELF1_(SC-631)/31944569/31944819/73

LTR10A 31977508-31977792 | TFBS: 11 | Strand: -

LTR10A 31977508-31977792 BLAT view
TFBS: 11 Strand: - Mutations: 147
JunD/31977462/31977722/192
FOSL2/31977504/31977723/1000
RXRA/31977539/31977683/944
p300/31977539/31977823/296
TCF4/31977561/31977945/118
SP1/31977563/31977843/410
FOXA1_(C-20)/31977616/31977858/933
FOXA1_(SC-101058)/31977621/31977846/893
FOXA2_(SC-6554)/31977668/31977818/444
BHLHE40/31977718/31977908/357
USF-1/31977726/31977859/213

LTR10A 102130272-102130795 | TFBS: 0 | Strand: +

LTR10A 102130272-102130795 BLAT view
TFBS: 0 Strand: + Mutations: 123
0

LTR10A 103291582-103292045 | TFBS: 0 | Strand: +

LTR10A 103291582-103292045 BLAT view
TFBS: 0 Strand: + Mutations: 126
0

LTR10A 103298257-103298337 | TFBS: 0 | Strand: +

LTR10A 103298257-103298337 BLAT view
TFBS: 0 Strand: + Mutations: 150
0

LTR10A 105453789-105454299 | TFBS: 0 | Strand: -

LTR10A 105453789-105454299 BLAT view
TFBS: 0 Strand: - Mutations: 162
0

LTR10A 107707399-107707952 | TFBS: 3 | Strand: -

LTR10A 107707399-107707952 BLAT view
TFBS: 3 Strand: - Mutations: 128
SETDB1/107707275/107707725/333
c-Myc/107707560/107707770/334
FOSL2/107707686/107707782/324

LTR10A 156367576-156367643 | TFBS: 0 | Strand: +

LTR10A 156367576-156367643 BLAT view
TFBS: 0 Strand: + Mutations: 145
0

LTR10A 156368266-156368509 | TFBS: 8 | Strand: +

LTR10A 156368266-156368509 BLAT view
TFBS: 8 Strand: + Mutations: 145
Pol2-4H8/156368207/156368471/175
MafK_(ab50322)/156368256/156368520/115
STAT3/156368311/156368587/301
FOSL1_(SC-183)/156368311/156368527/222
c-Jun/156368322/156368526/406
E2F6/156368323/156368483/228
E2F6_(H-50)/156368357/156368546/484
USF-1/156368374/156368450/288

LTR10A 164521701-164522202 | TFBS: 1 | Strand: -

LTR10A 164521701-164522202 BLAT view
TFBS: 1 Strand: - Mutations: 114
SETDB1/164521599/164522049/346

LTR10A 202452624-202452849 | TFBS: 9 | Strand: -

LTR10A 202452624-202452849 BLAT view
TFBS: 9 Strand: - Mutations: 204
JunD/202452514/202452804/238
Pol2-4H8/202452537/202452801/250
STAT3/202452540/202452791/355
FOSL1_(SC-183)/202452542/202452758/367
USF-1/202452547/202452797/203
FOSL2/202452549/202452785/216
c-Jun/202452571/202452775/585
NRSF/202452574/202452758/21
ELF1_(SC-631)/202452615/202452865/90

LTR10A 204492842-204493368 | TFBS: 4 | Strand: -

LTR10A 204492842-204493368 BLAT view
TFBS: 4 Strand: - Mutations: 137
SETDB1/204492856/204493342/734
STAT3/204492986/204493290/171
FOSL2/204493048/204493284/349
FOSL1_(SC-183)/204493107/204493323/249

LTR10A 212999264-212999818 | TFBS: 4 | Strand: -

LTR10A 212999264-212999818 BLAT view
TFBS: 4 Strand: - Mutations: 131
SETDB1/212999150/212999774/1000
KAP1/212999320/212999770/1000
RFX5_(N-494)/212999367/212999637/33
USF-1/212999548/212999778/94

LTR10A 236260078-236260448 | TFBS: 1 | Strand: -

LTR10A 236260078-236260448 BLAT view
TFBS: 1 Strand: - Mutations: 73
SETDB1/236259873/236260322/1000

LTR10A 236260460-236260535 | TFBS: 0 | Strand: -

LTR10A 236260460-236260535 BLAT view
TFBS: 0 Strand: - Mutations: 227
0

LTR10A 236260547-236260622 | TFBS: 0 | Strand: -

LTR10A 236260547-236260622 BLAT view
TFBS: 0 Strand: - Mutations: 200
0

LTR10A 236260634-236260870 | TFBS: 0 | Strand: -

LTR10A 236260634-236260870 BLAT view
TFBS: 0 Strand: - Mutations: 187
0

LTR10A 246910813-246911292 | TFBS: 0 | Strand: -

LTR10A 246910813-246911292 BLAT view
TFBS: 0 Strand: - Mutations: 121
0

LTR10A 246917735-246917801 | TFBS: 0 | Strand: -

LTR10A 246917735-246917801 BLAT view
TFBS: 0 Strand: - Mutations: 112
0

TFBS+