HERV genome browser

31156328

249250622

Insertions

LTR1 4417309-4417724 | TFBS: 0 | Strand: +

LTR1 4417309-4417724 BLAT view
TFBS: 0 Strand: + Mutations: 104
0

LTR1 20355307-20356162 | TFBS: 0 | Strand: -

LTR1 20355307-20356162 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR1 24164366-24165141 | TFBS: 9 | Strand: +

LTR1 24164366-24165141 BLAT view
TFBS: 9 Strand: + Mutations: 146
PU.1/24164272/24164472/131
Pol2-4H8/24164957/24165221/160
Pol2/24164969/24165374/380
TCF12/24165004/24165220/209
EBF1_(C-8)/24165004/24165179/624
c-Myc/24165025/24165235/320
Sin3Ak-20/24165037/24165287/334
Egr-1/24165037/24165256/390
Mxi1_(bHLH)/24165138/24165394/226

LTR1 24165206-24165264 | TFBS: 8 | Strand: +

LTR1 24165206-24165264 BLAT view
TFBS: 8 Strand: + Mutations: 138
Pol2-4H8/24164957/24165221/160
Pol2/24164969/24165374/380
TCF12/24165004/24165220/209
c-Myc/24165025/24165235/320
Sin3Ak-20/24165037/24165287/334
Egr-1/24165037/24165256/390
Mxi1_(bHLH)/24165138/24165394/226
CEBPB/24165148/24165364/498

LTR1 31983026-31983445 | TFBS: 2 | Strand: -

LTR1 31983026-31983445 BLAT view
TFBS: 2 Strand: - Mutations: 96
CTCF/31982901/31983296/176
CTCF_(SC-5916)/31983020/31983224/108

LTR1 39374240-39375005 | TFBS: 0 | Strand: -

LTR1 39374240-39375005 BLAT view
TFBS: 0 Strand: - Mutations: 128
0

LTR1 39438938-39439084 | TFBS: 3 | Strand: +

LTR1 39438938-39439084 BLAT view
TFBS: 3 Strand: + Mutations: 119
Egr-1/39438833/39439049/102
RPC155/39438961/39439205/18
TFIIIC-110/39439073/39439343/435

LTR1 39439376-39439985 | TFBS: 0 | Strand: +

LTR1 39439376-39439985 BLAT view
TFBS: 0 Strand: + Mutations: 119
0

LTR1 40193338-40194137 | TFBS: 3 | Strand: -

LTR1 40193338-40194137 BLAT view
TFBS: 3 Strand: - Mutations: 131
Pol2/40193790/40194066/111
PU.1/40193988/40194188/131
TBP/40193996/40194266/51

LTR1 48732779-48733424 | TFBS: 0 | Strand: -

LTR1 48732779-48733424 BLAT view
TFBS: 0 Strand: - Mutations: 156
0

LTR1 48733722-48733916 | TFBS: 0 | Strand: -

LTR1 48733722-48733916 BLAT view
TFBS: 0 Strand: - Mutations: 156
0

LTR1 50816115-50816865 | TFBS: 0 | Strand: +

LTR1 50816115-50816865 BLAT view
TFBS: 0 Strand: + Mutations: 164
0

LTR1 59759545-59760251 | TFBS: 0 | Strand: +

LTR1 59759545-59760251 BLAT view
TFBS: 0 Strand: + Mutations: 123
0

LTR1 60415390-60415436 | TFBS: 0 | Strand: -

LTR1 60415390-60415436 BLAT view
TFBS: 0 Strand: - Mutations: 65
0

LTR1 68760562-68760913 | TFBS: 0 | Strand: -

LTR1 68760562-68760913 BLAT view
TFBS: 0 Strand: - Mutations: 158
0

LTR1 68761224-68761691 | TFBS: 0 | Strand: -

LTR1 68761224-68761691 BLAT view
TFBS: 0 Strand: - Mutations: 158
0

LTR1 69325333-69326112 | TFBS: 0 | Strand: -

LTR1 69325333-69326112 BLAT view
TFBS: 0 Strand: - Mutations: 171
0

LTR1 69328932-69329136 | TFBS: 0 | Strand: -

LTR1 69328932-69329136 BLAT view
TFBS: 0 Strand: - Mutations: 186
0

LTR1 69329935-69330499 | TFBS: 0 | Strand: -

LTR1 69329935-69330499 BLAT view
TFBS: 0 Strand: - Mutations: 186
0

LTR1 69512787-69513595 | TFBS: 0 | Strand: +

LTR1 69512787-69513595 BLAT view
TFBS: 0 Strand: + Mutations: 160
0

LTR1 69771421-69772176 | TFBS: 5 | Strand: -

LTR1 69771421-69772176 BLAT view
TFBS: 5 Strand: - Mutations: 148
CTCF/69771293/69771677/773
CTCF_(C-20)/69771391/69771591/166
CTCFL_(SC-98982)/69771395/69771555/177
CTCF_(SC-5916)/69771409/69771613/268
Rad21/69771449/69771570/520

LTR1 73992358-73993087 | TFBS: 0 | Strand: +

LTR1 73992358-73993087 BLAT view
TFBS: 0 Strand: + Mutations: 144
0

LTR1 79510679-79511491 | TFBS: 3 | Strand: -

LTR1 79510679-79511491 BLAT view
TFBS: 3 Strand: - Mutations: 149
Rad21/79510734/79510970/192
CTCF/79510734/79511057/289
CTCF_(SC-5916)/79510780/79510984/217

LTR1 80493097-80493727 | TFBS: 1 | Strand: +

LTR1 80493097-80493727 BLAT view
TFBS: 1 Strand: + Mutations: 149
MafK_(ab50322)/80493399/80493639/114

LTR1 81097967-81098725 | TFBS: 0 | Strand: +

LTR1 81097967-81098725 BLAT view
TFBS: 0 Strand: + Mutations: 126
0

LTR1 81844849-81845668 | TFBS: 0 | Strand: -

LTR1 81844849-81845668 BLAT view
TFBS: 0 Strand: - Mutations: 132
0

LTR1 83438744-83439525 | TFBS: 0 | Strand: +

LTR1 83438744-83439525 BLAT view
TFBS: 0 Strand: + Mutations: 110
0

LTR1 86420673-86421368 | TFBS: 1 | Strand: +

LTR1 86420673-86421368 BLAT view
TFBS: 1 Strand: + Mutations: 176
GATA-2/86420913/86421257/215

LTR1 88085049-88085215 | TFBS: 0 | Strand: +

LTR1 88085049-88085215 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR1 88085511-88086142 | TFBS: 0 | Strand: +

LTR1 88085511-88086142 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR1 88099303-88100104 | TFBS: 0 | Strand: -

LTR1 88099303-88100104 BLAT view
TFBS: 0 Strand: - Mutations: 135
0

LTR1 94193755-94194555 | TFBS: 1 | Strand: -

LTR1 94193755-94194555 BLAT view
TFBS: 1 Strand: - Mutations: 131
PU.1/94194444/94194644/214

LTR1 98238931-98239753 | TFBS: 0 | Strand: +

LTR1 98238931-98239753 BLAT view
TFBS: 0 Strand: + Mutations: 176
0

LTR1 100170014-100170828 | TFBS: 4 | Strand: +

LTR1 100170014-100170828 BLAT view
TFBS: 4 Strand: + Mutations: 151
GATA-1/100169687/100170137/252
PU.1/100169903/100170103/243
Pol2/100170129/100170333/343
NRSF/100170148/100170404/64

LTR1 102122175-102123016 | TFBS: 0 | Strand: -

LTR1 102122175-102123016 BLAT view
TFBS: 0 Strand: - Mutations: 190
0

LTR1 105398283-105399066 | TFBS: 0 | Strand: -

LTR1 105398283-105399066 BLAT view
TFBS: 0 Strand: - Mutations: 162
0

LTR1 117417732-117418506 | TFBS: 1 | Strand: -

LTR1 117417732-117418506 BLAT view
TFBS: 1 Strand: - Mutations: 119
PU.1/117417519/117417735/93

LTR1 119591242-119591406 | TFBS: 0 | Strand: +

LTR1 119591242-119591406 BLAT view
TFBS: 0 Strand: + Mutations: 172
0

LTR1 119591732-119591942 | TFBS: 0 | Strand: +

LTR1 119591732-119591942 BLAT view
TFBS: 0 Strand: + Mutations: 172
0

LTR1 120014321-120014982 | TFBS: 0 | Strand: -

LTR1 120014321-120014982 BLAT view
TFBS: 0 Strand: - Mutations: 168
0

LTR1 120111111-120111945 | TFBS: 0 | Strand: -

LTR1 120111111-120111945 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

LTR1 120148440-120149257 | TFBS: 0 | Strand: -

LTR1 120148440-120149257 BLAT view
TFBS: 0 Strand: - Mutations: 158
0

LTR1 152350291-152351073 | TFBS: 0 | Strand: -

LTR1 152350291-152351073 BLAT view
TFBS: 0 Strand: - Mutations: 143
0

LTR1 152354041-152354125 | TFBS: 0 | Strand: -

LTR1 152354041-152354125 BLAT view
TFBS: 0 Strand: - Mutations: 96
0

LTR1 152515784-152516580 | TFBS: 5 | Strand: +

LTR1 152515784-152516580 BLAT view
TFBS: 5 Strand: + Mutations: 183
CTCF/152516325/152516695/738
CTCF_(C-20)/152516396/152516596/98
GR/152516401/152516671/102
TCF4/152516406/152516619/789
CTCFL_(SC-98982)/152516415/152516575/609

LTR1 163063125-163063902 | TFBS: 0 | Strand: +

LTR1 163063125-163063902 BLAT view
TFBS: 0 Strand: + Mutations: 126
0

LTR1 166391671-166392502 | TFBS: 0 | Strand: +

LTR1 166391671-166392502 BLAT view
TFBS: 0 Strand: + Mutations: 150
0

LTR1 173072353-173073185 | TFBS: 1 | Strand: -

LTR1 173072353-173073185 BLAT view
TFBS: 1 Strand: - Mutations: 147
SETDB1/173072116/173072566/295

LTR1 174681926-174682255 | TFBS: 0 | Strand: -

LTR1 174681926-174682255 BLAT view
TFBS: 0 Strand: - Mutations: 212
0

LTR1 176036351-176037153 | TFBS: 0 | Strand: +

LTR1 176036351-176037153 BLAT view
TFBS: 0 Strand: + Mutations: 163
0

LTR1 180701664-180702468 | TFBS: 0 | Strand: -

LTR1 180701664-180702468 BLAT view
TFBS: 0 Strand: - Mutations: 135
0

LTR1 183740800-183741562 | TFBS: 0 | Strand: +

LTR1 183740800-183741562 BLAT view
TFBS: 0 Strand: + Mutations: 128
0

LTR1 185372946-185373106 | TFBS: 0 | Strand: +

LTR1 185372946-185373106 BLAT view
TFBS: 0 Strand: + Mutations: 163
0

LTR1 185373424-185373595 | TFBS: 0 | Strand: +

LTR1 185373424-185373595 BLAT view
TFBS: 0 Strand: + Mutations: 163
0

LTR1 187805203-187805992 | TFBS: 0 | Strand: -

LTR1 187805203-187805992 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR1 188596701-188596911 | TFBS: 0 | Strand: -

LTR1 188596701-188596911 BLAT view
TFBS: 0 Strand: - Mutations: 217
0

LTR1 189063238-189063970 | TFBS: 0 | Strand: +

LTR1 189063238-189063970 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR1 189118709-189119468 | TFBS: 24 | Strand: +

LTR1 189118709-189119468 BLAT view
TFBS: 24 Strand: + Mutations: 144
ELF1_(SC-631)/189118634/189118884/138
PU.1/189118652/189118852/148
GABP/189118662/189118932/121
CEBPB/189118681/189118937/87
HA-E2F1/189118695/189119145/126
IRF1/189118721/189119005/136
ZBTB7A_(SC-34508)/189118769/189118979/569
TBP/189118775/189119004/313
Pol2(b)/189118782/189119138/709
HEY1/189118784/189119052/653
E2F6_(H-50)/189118785/189119017/1000
E2F4/189118795/189119055/304
Pol2-4H8/189118799/189119043/742
TAL1_(SC-12984)/189118805/189119055/60
Pol2/189118808/189119072/410
TAF1/189118834/189119005/908
E2F6/189118847/189119035/456
c-Myc/189118874/189119084/228
CTCF/189118918/189119202/669
Rad21/189118923/189119163/664
CTCFL_(SC-98982)/189118930/189119090/231
CTCF_(C-20)/189118956/189119156/86
CTCF_(SC-5916)/189118993/189119078/705
USF-1/189119026/189119289/181

LTR1 189731330-189732045 | TFBS: 0 | Strand: -

LTR1 189731330-189732045 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR1 190761713-190762514 | TFBS: 0 | Strand: -

LTR1 190761713-190762514 BLAT view
TFBS: 0 Strand: - Mutations: 193
0

LTR1 193186202-193186977 | TFBS: 4 | Strand: -

LTR1 193186202-193186977 BLAT view
TFBS: 4 Strand: - Mutations: 153
CTCF/193186110/193186437/117
PU.1/193186127/193186343/139
TCF12/193186160/193186376/256
ELF1_(SC-631)/193186235/193186304/146

LTR1 194086827-194087662 | TFBS: 4 | Strand: -

LTR1 194086827-194087662 BLAT view
TFBS: 4 Strand: - Mutations: 152
CTCF/194086793/194087090/648
Rad21/194086833/194087069/208
CTCF_(SC-5916)/194086881/194086969/478
FOXA1_(C-20)/194087642/194087866/165

LTR1 194311508-194312287 | TFBS: 7 | Strand: +

LTR1 194311508-194312287 BLAT view
TFBS: 7 Strand: + Mutations: 162
CTCF/194311979/194312372/1000
CTCF_(SC-5916)/194312065/194312289/1000
Rad21/194312081/194312317/346
ATF3/194312081/194312305/270
CTCF_(C-20)/194312094/194312294/121
USF-1/194312106/194312356/790
USF2/194312117/194312367/144

LTR1 198796239-198797016 | TFBS: 0 | Strand: -

LTR1 198796239-198797016 BLAT view
TFBS: 0 Strand: - Mutations: 165
0

LTR1 198800034-198800784 | TFBS: 0 | Strand: -

LTR1 198800034-198800784 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR1 208911343-208911817 | TFBS: 1 | Strand: -

LTR1 208911343-208911817 BLAT view
TFBS: 1 Strand: - Mutations: 110
CTCF/208911291/208911614/198

LTR1 208914363-208914613 | TFBS: 0 | Strand: -

LTR1 208914363-208914613 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR1 210248020-210248683 | TFBS: 0 | Strand: -

LTR1 210248020-210248683 BLAT view
TFBS: 0 Strand: - Mutations: 108
0

LTR1 210248977-210249171 | TFBS: 0 | Strand: -

LTR1 210248977-210249171 BLAT view
TFBS: 0 Strand: - Mutations: 108
0

LTR1 212027948-212028733 | TFBS: 0 | Strand: -

LTR1 212027948-212028733 BLAT view
TFBS: 0 Strand: - Mutations: 105
0

LTR1 212266458-212267265 | TFBS: 0 | Strand: -

LTR1 212266458-212267265 BLAT view
TFBS: 0 Strand: - Mutations: 111
0

LTR1 214926441-214927218 | TFBS: 4 | Strand: +

LTR1 214926441-214927218 BLAT view
TFBS: 4 Strand: + Mutations: 155
CHD2_(N-1250)/214926838/214927122/59
c-Myc/214926962/214927172/209
GATA-2/214926986/214927366/187
c-Fos/214927116/214927460/316

LTR1 218387242-218388067 | TFBS: 0 | Strand: +

LTR1 218387242-218388067 BLAT view
TFBS: 0 Strand: + Mutations: 141
0

LTR1 219402573-219402636 | TFBS: 0 | Strand: +

LTR1 219402573-219402636 BLAT view
TFBS: 0 Strand: + Mutations: 191
0

LTR1 219402744-219403169 | TFBS: 0 | Strand: +

LTR1 219402744-219403169 BLAT view
TFBS: 0 Strand: + Mutations: 101
0

LTR1 220526462-220527245 | TFBS: 3 | Strand: +

LTR1 220526462-220527245 BLAT view
TFBS: 3 Strand: + Mutations: 150
CTCF/220526951/220527352/295
Rad21/220527037/220527273/121
CTCF_(SC-5916)/220527059/220527263/139

LTR1 220552303-220552940 | TFBS: 0 | Strand: -

LTR1 220552303-220552940 BLAT view
TFBS: 0 Strand: - Mutations: 129
0

LTR1 220553251-220553440 | TFBS: 0 | Strand: -

LTR1 220553251-220553440 BLAT view
TFBS: 0 Strand: - Mutations: 129
0

LTR1 220640975-220641041 | TFBS: 0 | Strand: -

LTR1 220640975-220641041 BLAT view
TFBS: 0 Strand: - Mutations: 125
0

LTR1 221157035-221157841 | TFBS: 5 | Strand: +

LTR1 221157035-221157841 BLAT view
TFBS: 5 Strand: + Mutations: 146
CTCF/221157515/221157989/618
Rad21/221157627/221157863/158
CTCF_(SC-5916)/221157651/221157855/187
E2F6_(H-50)/221157658/221157858/114
CTCFL_(SC-98982)/221157704/221157864/387

LTR1 221545588-221546393 | TFBS: 0 | Strand: -

LTR1 221545588-221546393 BLAT view
TFBS: 0 Strand: - Mutations: 161
0

LTR1 223210644-223211385 | TFBS: 0 | Strand: -

LTR1 223210644-223211385 BLAT view
TFBS: 0 Strand: - Mutations: 192
0

LTR1 227941413-227942224 | TFBS: 2 | Strand: -

LTR1 227941413-227942224 BLAT view
TFBS: 2 Strand: - Mutations: 146
CTCF/227941823/227942027/81
CTCF/227942161/227942531/126

LTR1 227943478-227943594 | TFBS: 0 | Strand: +

LTR1 227943478-227943594 BLAT view
TFBS: 0 Strand: + Mutations: 310
0

LTR1 231017897-231018609 | TFBS: 0 | Strand: -

LTR1 231017897-231018609 BLAT view
TFBS: 0 Strand: - Mutations: 127
0

LTR1 232327235-232328011 | TFBS: 0 | Strand: +

LTR1 232327235-232328011 BLAT view
TFBS: 0 Strand: + Mutations: 139
0

LTR1 233582397-233583198 | TFBS: 0 | Strand: -

LTR1 233582397-233583198 BLAT view
TFBS: 0 Strand: - Mutations: 149
0

LTR1 244805726-244806527 | TFBS: 1 | Strand: +

LTR1 244805726-244806527 BLAT view
TFBS: 1 Strand: + Mutations: 143
E2F6_(H-50)/244805924/244806124/122

LTR1 246581598-246582039 | TFBS: 2 | Strand: -

LTR1 246581598-246582039 BLAT view
TFBS: 2 Strand: - Mutations: 119
CTCF/246581548/246581798/144
SETDB1/246582027/246582347/647

LTR1 246582668-246582930 | TFBS: 0 | Strand: -

LTR1 246582668-246582930 BLAT view
TFBS: 0 Strand: - Mutations: 154
0

TFBS+