HERV genome browser

31156328

249250622

Insertions

HERVK-int 12840257-12845090 | TFBS: 11 | Strand: -

HERVK-int 12840257-12845090 BLAT view
TFBS: 11 Strand: - Mutations: 161
SETDB1/12844853/12845303/377
CTCF/12841695/12842007/687
SMC3_(ab9263)/12841714/12841958/361
Rad21/12841721/12841978/594
CTCF_(C-20)/12841738/12841938/119
CTCF_(SC-5916)/12841756/12841893/498
CTCF/12843933/12844271/943
Rad21/12843975/12844211/1000
SMC3_(ab9263)/12843977/12844231/658
CTCF_(SC-5916)/12843986/12844202/446
CTCF_(C-20)/12844038/12844171/584

HERVK-int 13459295-13460029 | TFBS: 0 | Strand: +

HERVK-int 13459295-13460029 BLAT view
TFBS: 0 Strand: + Mutations: 151
0

HERVK-int 13460121-13466826 | TFBS: 0 | Strand: +

HERVK-int 13460121-13466826 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

HERVK-int 13680131-13680865 | TFBS: 0 | Strand: +

HERVK-int 13680131-13680865 BLAT view
TFBS: 0 Strand: + Mutations: 151
0

HERVK-int 13680957-13687662 | TFBS: 0 | Strand: +

HERVK-int 13680957-13687662 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

HERVK-int 33530085-33530711 | TFBS: 2 | Strand: +

HERVK-int 33530085-33530711 BLAT view
TFBS: 2 Strand: + Mutations: 93
KAP1/33529759/33530414/468
SETDB1/33529840/33530290/686

HERVK-int 36955535-36955979 | TFBS: 0 | Strand: -

HERVK-int 36955535-36955979 BLAT view
TFBS: 0 Strand: - Mutations: 88
0

HERVK-int 36955959-36956728 | TFBS: 0 | Strand: -

HERVK-int 36955959-36956728 BLAT view
TFBS: 0 Strand: - Mutations: 63
0

HERVK-int 75843738-75846282 | TFBS: 0 | Strand: +

HERVK-int 75843738-75846282 BLAT view
TFBS: 0 Strand: + Mutations: 10
0

HERVK-int 75846266-75846465 | TFBS: 0 | Strand: +

HERVK-int 75846266-75846465 BLAT view
TFBS: 0 Strand: + Mutations: 40
0

HERVK-int 75846464-75848175 | TFBS: 0 | Strand: +

HERVK-int 75846464-75848175 BLAT view
TFBS: 0 Strand: + Mutations: 7
0

HERVK-int 82689073-82689161 | TFBS: 0 | Strand: -

HERVK-int 82689073-82689161 BLAT view
TFBS: 0 Strand: - Mutations: 45
0

HERVK-int 150605361-150607138 | TFBS: 0 | Strand: -

HERVK-int 150605361-150607138 BLAT view
TFBS: 0 Strand: - Mutations: 40
0

HERVK-int 150607125-150607399 | TFBS: 0 | Strand: +

HERVK-int 150607125-150607399 BLAT view
TFBS: 0 Strand: + Mutations: 69
0

HERVK-int 155597424-155599135 | TFBS: 0 | Strand: -

HERVK-int 155597424-155599135 BLAT view
TFBS: 0 Strand: - Mutations: 5
0

HERVK-int 155599134-155604668 | TFBS: 0 | Strand: -

HERVK-int 155599134-155604668 BLAT view
TFBS: 0 Strand: - Mutations: 8
0

HERVK-int 160661543-160667128 | TFBS: 9 | Strand: +

HERVK-int 160661543-160667128 BLAT view
TFBS: 9 Strand: + Mutations: 27
USF-1/160662119/160662369/106
CTCF/160662209/160662607/479
Pol2-4H8/160662225/160662469/251
GATA2_(CG2-96)/160662235/160662465/165
TAL1_(SC-12984)/160662259/160662410/304
SMC3_(ab9263)/160662288/160662532/266
CTCF_(SC-5916)/160662337/160662490/484
Rad21/160662348/160662564/259
CTCF_(C-20)/160662357/160662557/73

HERVK-int 160667127-160668837 | TFBS: 0 | Strand: +

HERVK-int 160667127-160668837 BLAT view
TFBS: 0 Strand: + Mutations: 28
0

HERVK-int 166575594-166579171 | TFBS: 0 | Strand: -

HERVK-int 166575594-166579171 BLAT view
TFBS: 0 Strand: - Mutations: 124
0

HERVK-int 166579165-166579262 | TFBS: 0 | Strand: -

HERVK-int 166579165-166579262 BLAT view
TFBS: 0 Strand: - Mutations: 179
0

HERVK-int 207809419-207811122 | TFBS: 0 | Strand: -

HERVK-int 207809419-207811122 BLAT view
TFBS: 0 Strand: - Mutations: 44
0

HERVK-int 207811121-207811703 | TFBS: 0 | Strand: -

HERVK-int 207811121-207811703 BLAT view
TFBS: 0 Strand: - Mutations: 43
0

HERVK-int 207811681-207812636 | TFBS: 1 | Strand: -

HERVK-int 207811681-207812636 BLAT view
TFBS: 1 Strand: - Mutations: 55
CEBPB/207811885/207812140/1000

HERVK-int 238926590-238927773 | TFBS: 0 | Strand: -

HERVK-int 238926590-238927773 BLAT view
TFBS: 0 Strand: - Mutations: 139
0