HERV genome browser

31156328

249250622

Insertions

MER66C 1317469-1317668 | TFBS: 0 | Strand: +

MER66C 1317469-1317668 BLAT view
TFBS: 0 Strand: + Mutations: 278
0

MER66C 1318218-1318443 | TFBS: 0 | Strand: +

MER66C 1318218-1318443 BLAT view
TFBS: 0 Strand: + Mutations: 254
0

MER66C 1318712-1318727 | TFBS: 0 | Strand: +

MER66C 1318712-1318727 BLAT view
TFBS: 0 Strand: + Mutations: 254
0

MER66C 1318901-1319008 | TFBS: 0 | Strand: +

MER66C 1318901-1319008 BLAT view
TFBS: 0 Strand: + Mutations: 254
0

MER66C 8578931-8578989 | TFBS: 0 | Strand: +

MER66C 8578931-8578989 BLAT view
TFBS: 0 Strand: + Mutations: 207
0

MER66C 14789016-14789052 | TFBS: 0 | Strand: -

MER66C 14789016-14789052 BLAT view
TFBS: 0 Strand: - Mutations: 126
0

MER66C 14789420-14789891 | TFBS: 1 | Strand: -

MER66C 14789420-14789891 BLAT view
TFBS: 1 Strand: - Mutations: 126
TAL1_(SC-12984)/14789697/14789947/59

MER66C 15543741-15543893 | TFBS: 0 | Strand: +

MER66C 15543741-15543893 BLAT view
TFBS: 0 Strand: + Mutations: 132
0

MER66C 15545051-15545576 | TFBS: 10 | Strand: +

MER66C 15545051-15545576 BLAT view
TFBS: 10 Strand: + Mutations: 154
GATA-2/15544875/15545301/1000
eGFP-GATA2/15544888/15545272/370
c-Fos/15544951/15545295/559
c-Jun/15545003/15545279/654
PU.1/15545012/15545212/174
YY1_(C-20)/15545062/15545364/80
Sin3Ak-20/15545086/15545336/372
Mxi1_(bHLH)/15545131/15545387/368
Max/15545137/15545347/270
YY1/15545174/15545273/197

MER66C 26101243-26101293 | TFBS: 0 | Strand: +

MER66C 26101243-26101293 BLAT view
TFBS: 0 Strand: + Mutations: 160
0

MER66C 27555343-27555401 | TFBS: 0 | Strand: +

MER66C 27555343-27555401 BLAT view
TFBS: 0 Strand: + Mutations: 207
0

MER66C 40372668-40372736 | TFBS: 0 | Strand: -

MER66C 40372668-40372736 BLAT view
TFBS: 0 Strand: - Mutations: 178
0

MER66C 41057927-41058302 | TFBS: 6 | Strand: +

MER66C 41057927-41058302 BLAT view
TFBS: 6 Strand: + Mutations: 122
CTCF/41057847/41058221/740
SMC3_(ab9263)/41057903/41058147/411
IRF4_(M-17)/41057910/41058180/274
Rad21/41057913/41058160/705
CTCF_(SC-5916)/41057933/41058137/132
CTCF_(C-20)/41057941/41058141/141

MER66C 41058889-41059021 | TFBS: 0 | Strand: +

MER66C 41058889-41059021 BLAT view
TFBS: 0 Strand: + Mutations: 122
0

MER66C 44661395-44661803 | TFBS: 0 | Strand: +

MER66C 44661395-44661803 BLAT view
TFBS: 0 Strand: + Mutations: 145
0

MER66C 46799273-46799665 | TFBS: 20 | Strand: +

MER66C 46799273-46799665 BLAT view
TFBS: 20 Strand: + Mutations: 158
CTCF/46799181/46799550/453
SMC3_(ab9263)/46799227/46799496/353
Rad21/46799245/46799503/547
Znf143_(16618-1-AP)/46799247/46799451/65
CTCF_(SC-5916)/46799253/46799457/188
STAT1/46799258/46799618/215
POU2F2/46799264/46799521/387
Oct-2/46799264/46799521/389
CTCF_(C-20)/46799278/46799433/690
PU.1/46799295/46799495/191
FOXA2_(SC-6554)/46799307/46799531/265
RXRA/46799311/46799571/272
ELF1_(SC-631)/46799316/46799592/253
FOXA1_(C-20)/46799316/46799545/429
STAT3/46799317/46799567/185
FOXA1_(SC-101058)/46799354/46799481/426
TBP/46799434/46799704/684
Pol2/46799481/46799998/1000
Pol2-4H8/46799486/46799893/870
YY1/46799527/46799771/92

MER66C 46799946-46800051 | TFBS: 1 | Strand: +

MER66C 46799946-46800051 BLAT view
TFBS: 1 Strand: + Mutations: 158
Pol2/46799481/46799998/1000

MER66C 46833191-46833348 | TFBS: 0 | Strand: -

MER66C 46833191-46833348 BLAT view
TFBS: 0 Strand: - Mutations: 121
0

MER66C 51339178-51339577 | TFBS: 25 | Strand: +

MER66C 51339178-51339577 BLAT view
TFBS: 25 Strand: + Mutations: 199
ELF1_(SC-631)/51339037/51339287/119
CTCF/51339054/51339620/1000
CTCF_(SC-5916)/51339114/51339495/335
SMC3_(ab9263)/51339116/51339564/403
Rad21/51339119/51339573/747
Znf143_(16618-1-AP)/51339122/51339326/76
YY1_(C-20)/51339129/51339379/102
CTCFL_(SC-98982)/51339135/51339295/634
KAP1/51339219/51339643/644
SIRT6/51339253/51339509/489
NFKB/51339255/51339633/556
BCLAF1_(M33-P5B11)/51339275/51339525/310
POU2F2/51339287/51339511/369
Oct-2/51339287/51339511/370
eGFP-JunB/51339319/51339609/426
TBP/51339321/51339591/29
IRF4_(M-17)/51339337/51339607/469
CTCF_(C-20)/51339368/51339546/690
MafK_(ab50322)/51339371/51339635/322
CTCFL_(SC-98982)/51339373/51339533/973
eGFP-FOS/51339378/51339628/372
NF-E2/51339389/51339593/265
BATF/51339392/51339588/943
JunD/51339408/51339584/335
eGFP-JunD/51339415/51339524/1000

MER66C 51339679-51339737 | TFBS: 0 | Strand: -

MER66C 51339679-51339737 BLAT view
TFBS: 0 Strand: - Mutations: 158
0

MER66C 51590081-51590590 | TFBS: 1 | Strand: -

MER66C 51590081-51590590 BLAT view
TFBS: 1 Strand: - Mutations: 138
CTCF/51590301/51590681/113

MER66C 53094634-53094685 | TFBS: 0 | Strand: -

MER66C 53094634-53094685 BLAT view
TFBS: 0 Strand: - Mutations: 137
0

MER66C 71242267-71242457 | TFBS: 0 | Strand: +

MER66C 71242267-71242457 BLAT view
TFBS: 0 Strand: + Mutations: 146
0

MER66C 71242783-71243140 | TFBS: 0 | Strand: +

MER66C 71242783-71243140 BLAT view
TFBS: 0 Strand: + Mutations: 146
0

MER66C 72815542-72815595 | TFBS: 0 | Strand: +

MER66C 72815542-72815595 BLAT view
TFBS: 0 Strand: + Mutations: 151
0

MER66C 73475612-73475664 | TFBS: 0 | Strand: +

MER66C 73475612-73475664 BLAT view
TFBS: 0 Strand: + Mutations: 173
0

MER66C 73475693-73476137 | TFBS: 0 | Strand: +

MER66C 73475693-73476137 BLAT view
TFBS: 0 Strand: + Mutations: 173
0

MER66C 83241208-83241602 | TFBS: 8 | Strand: +

MER66C 83241208-83241602 BLAT view
TFBS: 8 Strand: + Mutations: 180
CTCF/83241094/83241453/1000
HA-E2F1/83241131/83241581/213
E2F4/83241157/83241417/265
CTCF_(SC-5916)/83241160/83241376/359
Rad21/83241166/83241410/1000
CTCF_(C-20)/83241175/83241375/125
CTCFL_(SC-98982)/83241215/83241375/527
POU5F1_(SC-9081)/83241221/83241421/418

MER66C 83243030-83243137 | TFBS: 0 | Strand: +

MER66C 83243030-83243137 BLAT view
TFBS: 0 Strand: + Mutations: 180
0

MER66C 83248277-83248357 | TFBS: 0 | Strand: +

MER66C 83248277-83248357 BLAT view
TFBS: 0 Strand: + Mutations: 262
0

MER66C 83248373-83248630 | TFBS: 0 | Strand: +

MER66C 83248373-83248630 BLAT view
TFBS: 0 Strand: + Mutations: 142
0

MER66C 105970240-105970545 | TFBS: 0 | Strand: -

MER66C 105970240-105970545 BLAT view
TFBS: 0 Strand: - Mutations: 197
0

MER66C 105970543-105970628 | TFBS: 0 | Strand: -

MER66C 105970543-105970628 BLAT view
TFBS: 0 Strand: - Mutations: 101
0

MER66C 143717470-143718011 | TFBS: 0 | Strand: -

MER66C 143717470-143718011 BLAT view
TFBS: 0 Strand: - Mutations: 193
0

MER66C 144452123-144452642 | TFBS: 0 | Strand: +

MER66C 144452123-144452642 BLAT view
TFBS: 0 Strand: + Mutations: 183
0

MER66C 147904979-147905520 | TFBS: 0 | Strand: -

MER66C 147904979-147905520 BLAT view
TFBS: 0 Strand: - Mutations: 193
0

MER66C 149259295-149259834 | TFBS: 0 | Strand: -

MER66C 149259295-149259834 BLAT view
TFBS: 0 Strand: - Mutations: 176
0

MER66C 149272627-149273136 | TFBS: 10 | Strand: -

MER66C 149272627-149273136 BLAT view
TFBS: 10 Strand: - Mutations: 204
CTCF/149272829/149273205/1000
SRF/149272846/149273026/99
YY1_(C-20)/149272848/149273098/80
POU2F2/149272893/149273133/820
Oct-2/149272893/149273133/824
SMC3_(ab9263)/149272905/149273152/377
Rad21/149272905/149273145/433
FOXA1_(C-20)/149272919/149273055/866
CTCF_(SC-5916)/149272920/149273140/230
CTCF_(C-20)/149272925/149273125/203

MER66C 149644912-149645431 | TFBS: 0 | Strand: -

MER66C 149644912-149645431 BLAT view
TFBS: 0 Strand: - Mutations: 185
0

MER66C 149658229-149658738 | TFBS: 12 | Strand: -

MER66C 149658229-149658738 BLAT view
TFBS: 12 Strand: - Mutations: 184
CTCF/149658428/149658797/1000
YY1_(C-20)/149658452/149658716/159
YY1/149658453/149658697/91
SRF/149658455/149658575/423
FOXA1_(C-20)/149658464/149658587/737
EBF1_(C-8)/149658466/149658702/144
SMC3_(ab9263)/149658468/149658759/470
CTCF_(SC-5916)/149658492/149658708/394
POU2F2/149658498/149658695/1000
Oct-2/149658498/149658695/1000
Rad21/149658527/149658743/657
CTCF_(C-20)/149658607/149658712/389

MER66C 153460994-153461091 | TFBS: 0 | Strand: -

MER66C 153460994-153461091 BLAT view
TFBS: 0 Strand: - Mutations: 144
0

MER66C 154353410-154353456 | TFBS: 0 | Strand: -

MER66C 154353410-154353456 BLAT view
TFBS: 0 Strand: - Mutations: 43
0

MER66C 155692865-155692926 | TFBS: 0 | Strand: -

MER66C 155692865-155692926 BLAT view
TFBS: 0 Strand: - Mutations: 229
0

MER66C 156135456-156135509 | TFBS: 0 | Strand: -

MER66C 156135456-156135509 BLAT view
TFBS: 0 Strand: - Mutations: 151
0

MER66C 176686288-176686814 | TFBS: 3 | Strand: +

MER66C 176686288-176686814 BLAT view
TFBS: 3 Strand: + Mutations: 192
GATA-2/176686182/176686526/271
GATA2_(CG2-96)/176686276/176686506/178
CTCF/176686290/176686510/157

MER66C 187340985-187341456 | TFBS: 0 | Strand: +

MER66C 187340985-187341456 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

MER66C 187341647-187342133 | TFBS: 0 | Strand: -

MER66C 187341647-187342133 BLAT view
TFBS: 0 Strand: - Mutations: 151
0

MER66C 187343118-187343151 | TFBS: 0 | Strand: +

MER66C 187343118-187343151 BLAT view
TFBS: 0 Strand: + Mutations: 31
0

MER66C 188841859-188841913 | TFBS: 0 | Strand: -

MER66C 188841859-188841913 BLAT view
TFBS: 0 Strand: - Mutations: 148
0

MER66C 191152817-191153234 | TFBS: 0 | Strand: +

MER66C 191152817-191153234 BLAT view
TFBS: 0 Strand: + Mutations: 253
0

MER66C 207752742-207753228 | TFBS: 15 | Strand: +

MER66C 207752742-207753228 BLAT view
TFBS: 15 Strand: + Mutations: 131
CTCF/207752655/207753019/1000
KAP1/207752687/207753137/513
Rad21/207752725/207752971/940
SMC3_(ab9263)/207752727/207752972/1000
STAT1/207752736/207753118/292
YY1/207752736/207753075/410
YY1_(C-20)/207752743/207753016/465
CTCF_(SC-5916)/207752753/207752969/521
Sin3Ak-20/207752770/207753020/251
Mxi1_(bHLH)/207752773/207753029/747
FOXA1_(C-20)/207752789/207753013/153
Max/207752795/207753071/446
STAT3/207752808/207753062/269
SP1/207752810/207753074/207
CTCF_(C-20)/207752848/207752902/418

MER66C 207884702-207884969 | TFBS: 9 | Strand: +

MER66C 207884702-207884969 BLAT view
TFBS: 9 Strand: + Mutations: 147
CTCF/207884625/207884995/569
Rad21/207884691/207884934/346
SMC3_(ab9263)/207884698/207884934/316
CTCF_(C-20)/207884702/207884902/71
CTCF_(SC-5916)/207884730/207884934/98
Mxi1_(bHLH)/207884740/207884996/280
STAT3/207884740/207884989/1000
IRF1/207884772/207885056/220
STAT1/207884805/207884917/337

MER66C 207885272-207885508 | TFBS: 0 | Strand: +

MER66C 207885272-207885508 BLAT view
TFBS: 0 Strand: + Mutations: 147
0

MER66C 211763293-211763344 | TFBS: 0 | Strand: +

MER66C 211763293-211763344 BLAT view
TFBS: 0 Strand: + Mutations: 216
0

MER66C 219588946-219589020 | TFBS: 0 | Strand: -

MER66C 219588946-219589020 BLAT view
TFBS: 0 Strand: - Mutations: 68
0

MER66C 219589730-219590258 | TFBS: 8 | Strand: -

MER66C 219589730-219590258 BLAT view
TFBS: 8 Strand: - Mutations: 148
CTCF/219589933/219590369/1000
CTCF_(SC-5916)/219590007/219590255/259
YY1_(C-20)/219590024/219590274/80
Rad21/219590026/219590281/532
SMC3_(ab9263)/219590028/219590289/501
CTCFL_(SC-98982)/219590046/219590206/228
Znf143_(16618-1-AP)/219590062/219590266/63
CTCF_(C-20)/219590127/219590203/434

MER66C 223823076-223823154 | TFBS: 2 | Strand: -

MER66C 223823076-223823154 BLAT view
TFBS: 2 Strand: - Mutations: 221
FOXA1_(SC-101058)/223823044/223823314/140
FOXA1_(C-20)/223823044/223823304/152

MER66C 226153414-226153486 | TFBS: 0 | Strand: +

MER66C 226153414-226153486 BLAT view
TFBS: 0 Strand: + Mutations: 183
0

MER66C 229745747-229745799 | TFBS: 0 | Strand: -

MER66C 229745747-229745799 BLAT view
TFBS: 0 Strand: - Mutations: 192
0

MER66C 229850815-229851309 | TFBS: 8 | Strand: +

MER66C 229850815-229851309 BLAT view
TFBS: 8 Strand: + Mutations: 128
ERalpha_a/229850682/229850958/97
CTCF/229850693/229851081/933
FOXA1_(C-20)/229850707/229850931/209
SMC3_(ab9263)/229850799/229851045/648
Rad21/229850802/229851095/480
YY1_(C-20)/229850808/229851058/105
CTCF_(SC-5916)/229850816/229851071/115
CTCF_(C-20)/229850820/229851020/348

MER66C 231860993-231861486 | TFBS: 13 | Strand: +

MER66C 231860993-231861486 BLAT view
TFBS: 13 Strand: + Mutations: 114
CTCF/231860926/231861276/1000
Rad21/231860976/231861218/756
SMC3_(ab9263)/231860984/231861228/335
POU2F2/231860987/231861227/241
Oct-2/231860987/231861227/240
CTCF_(C-20)/231861004/231861204/156
Mxi1_(bHLH)/231861043/231861299/278
CTCF_(SC-5916)/231861043/231861175/430
GABP/231861056/231861326/24
ELF1_(SC-631)/231861135/231861221/170
MafF_(M8194)/231861182/231861452/160
MafK_(SC-477)/231861193/231861437/332
MafK_(ab50322)/231861211/231861451/178

MER66C 237748146-237748195 | TFBS: 0 | Strand: -

MER66C 237748146-237748195 BLAT view
TFBS: 0 Strand: - Mutations: 245
0

MER66C 239657135-239657696 | TFBS: 0 | Strand: -

MER66C 239657135-239657696 BLAT view
TFBS: 0 Strand: - Mutations: 147
0

MER66C 240806917-240806955 | TFBS: 0 | Strand: -

MER66C 240806917-240806955 BLAT view
TFBS: 0 Strand: - Mutations: 158
0

MER66C 242517344-242517861 | TFBS: 0 | Strand: +

MER66C 242517344-242517861 BLAT view
TFBS: 0 Strand: + Mutations: 153
0

MER66C 244714952-244715013 | TFBS: 0 | Strand: +

MER66C 244714952-244715013 BLAT view
TFBS: 0 Strand: + Mutations: 115
0

MER66C 247957294-247957796 | TFBS: 0 | Strand: +

MER66C 247957294-247957796 BLAT view
TFBS: 0 Strand: + Mutations: 161
0

MER66C 249168543-249168583 | TFBS: 38 | Strand: -

MER66C 249168543-249168583 BLAT view
TFBS: 38 Strand: - Mutations: 175
TBP/249167843/249168675/1000
RPC155/249167882/249168798/1000
CEBPB/249168277/249168650/405
c-Jun/249168278/249168554/514
p300_(N-15)/249168279/249168565/1000
JunD/249168280/249168601/311
FOXA1_(SC-101058)/249168293/249168563/175
FOXA1_(C-20)/249168296/249168556/199
BRF1/249168305/249168557/969
CHD2_(N-1250)/249168321/249168605/63
NFKB/249168331/249168711/451
TAL1_(SC-12984)/249168332/249168582/75
GTF2F1_(RAP-74)/249168335/249168631/390
RFX5_(N-494)/249168336/249168633/100
POU2F2/249168346/249168586/302
Oct-2/249168346/249168586/301
Pol3/249168352/249168723/721
Mxi1_(bHLH)/249168356/249168612/226
ELF1_(SC-631)/249168356/249168663/164
YY1/249168362/249168654/77
ZEB1_(SC-25388)/249168363/249168587/424
p300/249168363/249168587/288
AP-2alpha/249168374/249168758/418
HSF1/249168379/249168629/659
AP-2gamma/249168384/249168754/558
YY1_(C-20)/249168389/249168663/158
USF-1/249168391/249168641/94
GABP/249168395/249168665/22
THAP1_(SC-98174)/249168398/249168582/41
IRF4_(M-17)/249168404/249168674/345
ETS1/249168405/249168645/771
TFIIIC-110/249168406/249168704/662
HDAC2_(SC-6296)/249168429/249168679/403
MEF2A/249168430/249168686/278
c-Myc/249168431/249168691/383
BATF/249168447/249168663/166
TCF12/249168450/249168666/199
GR/249168514/249168730/126

TFBS+