HERV genome browser

31156328

249250622

Insertions

MamGypLTR3 37208851-37208985 | TFBS: 0 | Strand: +

MamGypLTR3 37208851-37208985 BLAT view
TFBS: 0 Strand: + Mutations: 307
0

MamGypLTR3 41909850-41910183 | TFBS: 4 | Strand: -

MamGypLTR3 41909850-41910183 BLAT view
TFBS: 4 Strand: - Mutations: 323
KAP1/41909888/41910338/482
CTCF/41909916/41910307/674
SETDB1/41909958/41910571/924
CTCF_(SC-5916)/41910014/41910218/204

MamGypLTR3 43992335-43992548 | TFBS: 0 | Strand: +

MamGypLTR3 43992335-43992548 BLAT view
TFBS: 0 Strand: + Mutations: 294
0

MamGypLTR3 43992580-43992719 | TFBS: 0 | Strand: +

MamGypLTR3 43992580-43992719 BLAT view
TFBS: 0 Strand: + Mutations: 326
0

MamGypLTR3 46262803-46262973 | TFBS: 0 | Strand: +

MamGypLTR3 46262803-46262973 BLAT view
TFBS: 0 Strand: + Mutations: 296
0

MamGypLTR3 46263273-46263491 | TFBS: 0 | Strand: +

MamGypLTR3 46263273-46263491 BLAT view
TFBS: 0 Strand: + Mutations: 296
0

MamGypLTR3 46265053-46265169 | TFBS: 0 | Strand: +

MamGypLTR3 46265053-46265169 BLAT view
TFBS: 0 Strand: + Mutations: 307
0

MamGypLTR3 48964097-48964693 | TFBS: 11 | Strand: -

MamGypLTR3 48964097-48964693 BLAT view
TFBS: 11 Strand: - Mutations: 313
CTCF/48963709/48964613/1000
GATA-2/48963765/48964109/142
GATA-1/48963808/48964258/201
Max/48964211/48964487/448
USF-1/48964219/48964484/98
USF1_(SC-8983)/48964230/48964450/42
Rad21/48964231/48964504/182
CTCF_(SC-5916)/48964247/48964480/214
CTCF_(C-20)/48964252/48964452/217
E2F6_(H-50)/48964259/48964459/119
NRSF/48964320/48964416/56

MamGypLTR3 52369240-52369320 | TFBS: 0 | Strand: -

MamGypLTR3 52369240-52369320 BLAT view
TFBS: 0 Strand: - Mutations: 254
0

MamGypLTR3 54597556-54597857 | TFBS: 1 | Strand: +

MamGypLTR3 54597556-54597857 BLAT view
TFBS: 1 Strand: + Mutations: 263
CTCF/54597519/54597754/110

MamGypLTR3 58487172-58487286 | TFBS: 0 | Strand: +

MamGypLTR3 58487172-58487286 BLAT view
TFBS: 0 Strand: + Mutations: 330
0

MamGypLTR3 59732877-59732952 | TFBS: 0 | Strand: -

MamGypLTR3 59732877-59732952 BLAT view
TFBS: 0 Strand: - Mutations: 333
0

MamGypLTR3 61182475-61182579 | TFBS: 0 | Strand: -

MamGypLTR3 61182475-61182579 BLAT view
TFBS: 0 Strand: - Mutations: 267
0

MamGypLTR3 61184473-61184610 | TFBS: 0 | Strand: -

MamGypLTR3 61184473-61184610 BLAT view
TFBS: 0 Strand: - Mutations: 258
0

MamGypLTR3 67484503-67484749 | TFBS: 0 | Strand: +

MamGypLTR3 67484503-67484749 BLAT view
TFBS: 0 Strand: + Mutations: 290
0

MamGypLTR3 68323994-68324157 | TFBS: 0 | Strand: +

MamGypLTR3 68323994-68324157 BLAT view
TFBS: 0 Strand: + Mutations: 306
0

MamGypLTR3 77765212-77765400 | TFBS: 0 | Strand: -

MamGypLTR3 77765212-77765400 BLAT view
TFBS: 0 Strand: - Mutations: 295
0

MamGypLTR3 78812486-78812651 | TFBS: 0 | Strand: -

MamGypLTR3 78812486-78812651 BLAT view
TFBS: 0 Strand: - Mutations: 304
0

MamGypLTR3 78814540-78814583 | TFBS: 0 | Strand: -

MamGypLTR3 78814540-78814583 BLAT view
TFBS: 0 Strand: - Mutations: 233
0

MamGypLTR3 83953024-83953305 | TFBS: 0 | Strand: -

MamGypLTR3 83953024-83953305 BLAT view
TFBS: 0 Strand: - Mutations: 343
0

MamGypLTR3 83953320-83953413 | TFBS: 0 | Strand: -

MamGypLTR3 83953320-83953413 BLAT view
TFBS: 0 Strand: - Mutations: 261
0

MamGypLTR3 84621455-84621676 | TFBS: 0 | Strand: -

MamGypLTR3 84621455-84621676 BLAT view
TFBS: 0 Strand: - Mutations: 349
0

MamGypLTR3 84621963-84622155 | TFBS: 8 | Strand: -

MamGypLTR3 84621963-84622155 BLAT view
TFBS: 8 Strand: - Mutations: 349
TCF4/84621921/84622259/1000
c-Jun/84621986/84622282/1000
p300_(N-15)/84621995/84622279/361
c-Fos/84621998/84622268/1000
p300/84622000/84622275/1000
JunD/84622018/84622308/436
Pol2-4H8/84622051/84622165/392
PU.1/84622073/84622303/173

MamGypLTR3 87217147-87217299 | TFBS: 0 | Strand: -

MamGypLTR3 87217147-87217299 BLAT view
TFBS: 0 Strand: - Mutations: 347
0

MamGypLTR3 87749873-87750636 | TFBS: 0 | Strand: +

MamGypLTR3 87749873-87750636 BLAT view
TFBS: 0 Strand: + Mutations: 319
0

MamGypLTR3 88087671-88087801 | TFBS: 1 | Strand: -

MamGypLTR3 88087671-88087801 BLAT view
TFBS: 1 Strand: - Mutations: 302
CTCF/88087622/88087992/244

MamGypLTR3 92019761-92020086 | TFBS: 0 | Strand: -

MamGypLTR3 92019761-92020086 BLAT view
TFBS: 0 Strand: - Mutations: 349
0

MamGypLTR3 92020468-92020884 | TFBS: 3 | Strand: -

MamGypLTR3 92020468-92020884 BLAT view
TFBS: 3 Strand: - Mutations: 349
CTCF/92020626/92020996/255
Rad21/92020712/92020954/267
CTCF_(SC-5916)/92020732/92020936/101

MamGypLTR3 94823133-94823317 | TFBS: 3 | Strand: -

MamGypLTR3 94823133-94823317 BLAT view
TFBS: 3 Strand: - Mutations: 341
FOXA1_(C-20)/94823277/94823537/162
FOXA1_(SC-101058)/94823283/94823553/185
FOXA2_(SC-6554)/94823284/94823508/138

MamGypLTR3 94823393-94823609 | TFBS: 3 | Strand: -

MamGypLTR3 94823393-94823609 BLAT view
TFBS: 3 Strand: - Mutations: 347
FOXA1_(C-20)/94823277/94823537/162
FOXA1_(SC-101058)/94823283/94823553/185
FOXA2_(SC-6554)/94823284/94823508/138

MamGypLTR3 94823885-94824129 | TFBS: 0 | Strand: -

MamGypLTR3 94823885-94824129 BLAT view
TFBS: 0 Strand: - Mutations: 266
0

MamGypLTR3 95245000-95245115 | TFBS: 0 | Strand: +

MamGypLTR3 95245000-95245115 BLAT view
TFBS: 0 Strand: + Mutations: 291
0

MamGypLTR3 100084904-100085209 | TFBS: 1 | Strand: -

MamGypLTR3 100084904-100085209 BLAT view
TFBS: 1 Strand: - Mutations: 308
STAT3/100085174/100085432/347

MamGypLTR3 102148187-102148349 | TFBS: 0 | Strand: +

MamGypLTR3 102148187-102148349 BLAT view
TFBS: 0 Strand: + Mutations: 325
0

MamGypLTR3 110332473-110332575 | TFBS: 0 | Strand: +

MamGypLTR3 110332473-110332575 BLAT view
TFBS: 0 Strand: + Mutations: 333
0

MamGypLTR3 110332727-110332961 | TFBS: 0 | Strand: +

MamGypLTR3 110332727-110332961 BLAT view
TFBS: 0 Strand: + Mutations: 358
0

MamGypLTR3 113589130-113589294 | TFBS: 0 | Strand: -

MamGypLTR3 113589130-113589294 BLAT view
TFBS: 0 Strand: - Mutations: 194
0

MamGypLTR3 115064890-115065151 | TFBS: 1 | Strand: +

MamGypLTR3 115064890-115065151 BLAT view
TFBS: 1 Strand: + Mutations: 252
TAL1_(SC-12984)/115064797/115065047/72

MamGypLTR3 117404117-117404229 | TFBS: 0 | Strand: +

MamGypLTR3 117404117-117404229 BLAT view
TFBS: 0 Strand: + Mutations: 261
0

MamGypLTR3 119069013-119069100 | TFBS: 0 | Strand: -

MamGypLTR3 119069013-119069100 BLAT view
TFBS: 0 Strand: - Mutations: 228
0

MamGypLTR3 119870833-119870961 | TFBS: 1 | Strand: +

MamGypLTR3 119870833-119870961 BLAT view
TFBS: 1 Strand: + Mutations: 309
CTCF/119870460/119870853/696

MamGypLTR3 150886488-150886756 | TFBS: 0 | Strand: +

MamGypLTR3 150886488-150886756 BLAT view
TFBS: 0 Strand: + Mutations: 314
0

MamGypLTR3 158365513-158365918 | TFBS: 0 | Strand: +

MamGypLTR3 158365513-158365918 BLAT view
TFBS: 0 Strand: + Mutations: 320
0

MamGypLTR3 159331567-159331853 | TFBS: 1 | Strand: -

MamGypLTR3 159331567-159331853 BLAT view
TFBS: 1 Strand: - Mutations: 384
ELF1_(SC-631)/159331489/159331739/91

MamGypLTR3 165437847-165438260 | TFBS: 0 | Strand: -

MamGypLTR3 165437847-165438260 BLAT view
TFBS: 0 Strand: - Mutations: 279
0

MamGypLTR3 166024707-166024864 | TFBS: 0 | Strand: +

MamGypLTR3 166024707-166024864 BLAT view
TFBS: 0 Strand: + Mutations: 304
0

MamGypLTR3 172734508-172734689 | TFBS: 0 | Strand: -

MamGypLTR3 172734508-172734689 BLAT view
TFBS: 0 Strand: - Mutations: 314
0

MamGypLTR3 175195430-175195664 | TFBS: 0 | Strand: -

MamGypLTR3 175195430-175195664 BLAT view
TFBS: 0 Strand: - Mutations: 289
0

MamGypLTR3 185568704-185569020 | TFBS: 0 | Strand: +

MamGypLTR3 185568704-185569020 BLAT view
TFBS: 0 Strand: + Mutations: 331
0

MamGypLTR3 187174887-187175056 | TFBS: 0 | Strand: +

MamGypLTR3 187174887-187175056 BLAT view
TFBS: 0 Strand: + Mutations: 389
0

MamGypLTR3 187471149-187471321 | TFBS: 0 | Strand: -

MamGypLTR3 187471149-187471321 BLAT view
TFBS: 0 Strand: - Mutations: 323
0

MamGypLTR3 191394862-191394929 | TFBS: 0 | Strand: -

MamGypLTR3 191394862-191394929 BLAT view
TFBS: 0 Strand: - Mutations: 284
0

MamGypLTR3 193254935-193255163 | TFBS: 0 | Strand: +

MamGypLTR3 193254935-193255163 BLAT view
TFBS: 0 Strand: + Mutations: 280
0

MamGypLTR3 197827164-197827259 | TFBS: 0 | Strand: +

MamGypLTR3 197827164-197827259 BLAT view
TFBS: 0 Strand: + Mutations: 272
0

MamGypLTR3 201088516-201088724 | TFBS: 6 | Strand: +

MamGypLTR3 201088516-201088724 BLAT view
TFBS: 6 Strand: + Mutations: 294
CTCF/201088356/201088731/1000
SMC3_(ab9263)/201088413/201088659/648
Rad21/201088419/201088669/664
CTCF_(SC-5916)/201088433/201088649/732
Znf143_(16618-1-AP)/201088438/201088642/58
CTCF_(C-20)/201088472/201088629/650

MamGypLTR3 203387692-203387946 | TFBS: 0 | Strand: +

MamGypLTR3 203387692-203387946 BLAT view
TFBS: 0 Strand: + Mutations: 287
0

MamGypLTR3 203506144-203506309 | TFBS: 20 | Strand: +

MamGypLTR3 203506144-203506309 BLAT view
TFBS: 20 Strand: + Mutations: 264
CEBPB/203506006/203506444/1000
GTF2F1_(RAP-74)/203506016/203506312/354
STAT1/203506056/203506416/163
p300/203506061/203506456/218
p300_(N-15)/203506079/203506370/1000
AP-2alpha/203506081/203506465/416
RFX5_(N-494)/203506098/203506354/77
STAT3/203506100/203506337/1000
BRCA1_(C-1863)/203506105/203506365/109
c-Jun/203506117/203506413/896
TBP/203506123/203506423/87
SMC3_(ab9263)/203506125/203506361/261
AP-2gamma/203506130/203506500/605
Rad21/203506147/203506367/221
Mxi1_(bHLH)/203506148/203506398/335
GR/203506150/203506420/150
c-Fos/203506178/203506408/642
JunD/203506194/203506380/882
Ini1/203506240/203506560/645
BAF155/203506270/203506720/644

MamGypLTR3 204678691-204678864 | TFBS: 0 | Strand: -

MamGypLTR3 204678691-204678864 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

MamGypLTR3 219491257-219491487 | TFBS: 9 | Strand: +

MamGypLTR3 219491257-219491487 BLAT view
TFBS: 9 Strand: + Mutations: 291
CTCF/219491064/219491480/1000
SMC3_(ab9263)/219491149/219491407/396
Rad21/219491157/219491404/1000
CTCF_(SC-5916)/219491172/219491388/471
FOXA1_(C-20)/219491178/219491473/210
CTCF_(C-20)/219491191/219491391/268
FOXA1_(SC-101058)/219491198/219491468/279
FOXA2_(SC-6554)/219491239/219491463/263
CEBPB/219491263/219491479/650

MamGypLTR3 223657812-223657961 | TFBS: 0 | Strand: -

MamGypLTR3 223657812-223657961 BLAT view
TFBS: 0 Strand: - Mutations: 314
0

MamGypLTR3 225083953-225084093 | TFBS: 0 | Strand: +

MamGypLTR3 225083953-225084093 BLAT view
TFBS: 0 Strand: + Mutations: 307
0

MamGypLTR3 227111337-227111553 | TFBS: 0 | Strand: -

MamGypLTR3 227111337-227111553 BLAT view
TFBS: 0 Strand: - Mutations: 281
0

MamGypLTR3 227643854-227643918 | TFBS: 0 | Strand: -

MamGypLTR3 227643854-227643918 BLAT view
TFBS: 0 Strand: - Mutations: 219
0

MamGypLTR3 232951187-232951355 | TFBS: 0 | Strand: -

MamGypLTR3 232951187-232951355 BLAT view
TFBS: 0 Strand: - Mutations: 353
0

MamGypLTR3 233595952-233596243 | TFBS: 1 | Strand: +

MamGypLTR3 233595952-233596243 BLAT view
TFBS: 1 Strand: + Mutations: 336
BATF/233595887/233596103/136

MamGypLTR3 233600746-233600882 | TFBS: 1 | Strand: +

MamGypLTR3 233600746-233600882 BLAT view
TFBS: 1 Strand: + Mutations: 319
KAP1/233600754/233601204/745

MamGypLTR3 235074863-235074937 | TFBS: 0 | Strand: +

MamGypLTR3 235074863-235074937 BLAT view
TFBS: 0 Strand: + Mutations: 260
0

MamGypLTR3 237077587-237077927 | TFBS: 6 | Strand: +

MamGypLTR3 237077587-237077927 BLAT view
TFBS: 6 Strand: + Mutations: 347
CCNT2/237077791/237078107/365
Pol2-4H8/237077824/237078068/479
GATA2_(CG2-96)/237077831/237078061/510
TAL1_(SC-12984)/237077838/237078068/692
GATA-2/237077838/237078108/384
GATA-1/237077847/237078123/373

MamGypLTR3 238068809-238069496 | TFBS: 0 | Strand: +

MamGypLTR3 238068809-238069496 BLAT view
TFBS: 0 Strand: + Mutations: 318
0

MamGypLTR3 239144950-239145003 | TFBS: 0 | Strand: -

MamGypLTR3 239144950-239145003 BLAT view
TFBS: 0 Strand: - Mutations: 226
0

MamGypLTR3 246932052-246932275 | TFBS: 1 | Strand: -

MamGypLTR3 246932052-246932275 BLAT view
TFBS: 1 Strand: - Mutations: 294
STAT3/246932081/246932152/144

MamGypLTR3 246932332-246932380 | TFBS: 0 | Strand: -

MamGypLTR3 246932332-246932380 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

TFBS+