Human LTR-retrotransposon genome browser

» Total HERV Statistics » HERV Genome Browser » TFBS dependence on HERV Divergence

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Choose repeat family:
Choose chromosome:
If you have specific coordinate input it here: or leave field blank.
31156328
0
249250622
Insertions
LTR73 73836543-73836715 | TFBS: 0 | Strand: +
LTR73 73836543-73836715 BLAT view
TFBS: 0   Strand: +   Mutations: 173
0
LTR73 73837023-73837379 | TFBS: 0 | Strand: +
LTR73 73837023-73837379 BLAT view
TFBS: 0   Strand: +   Mutations: 173
0
LTR73 74174775-74175336 | TFBS: 0 | Strand: +
LTR73 74174775-74175336 BLAT view
TFBS: 0   Strand: +   Mutations: 270
0
LTR73 143681789-143682344 | TFBS: 0 | Strand: -
LTR73 143681789-143682344 BLAT view
TFBS: 0   Strand: -   Mutations: 232
0
LTR73 144316359-144316933 | TFBS: 0 | Strand: +
LTR73 144316359-144316933 BLAT view
TFBS: 0   Strand: +   Mutations: 233
0
LTR73 144496602-144497176 | TFBS: 0 | Strand: +
LTR73 144496602-144497176 BLAT view
TFBS: 0   Strand: +   Mutations: 233
0
LTR73 146849291-146849843 | TFBS: 17 | Strand: -
LTR73 146849291-146849843 BLAT view
TFBS: 17   Strand: -   Mutations: 111
PU.1/146849327/146849527/208
SRF/146849493/146849673/311
TBP/146849553/146849823/45
GATA-1/146849565/146850015/373
eGFP-GATA2/146849594/146849978/523
GATA-2/146849622/146849892/354
TAL1_(SC-12984)/146849623/146849931/1000
p300_(F-4)/146849626/146849902/650
Pol2(b)/146849632/146849988/334
Pol2-4H8/146849635/146849879/638
GATA2_(CG2-96)/146849647/146849877/844
Brg1/146849673/146850017/879
CCNT2/146849682/146849998/719
CEBPB/146849700/146849956/279
Pol2/146849704/146850114/593
eGFP-JunD/146849742/146850038/227
HMGN3/146849759/146850063/321
LTR73 147869302-147869857 | TFBS: 0 | Strand: -
LTR73 147869302-147869857 BLAT view
TFBS: 0   Strand: -   Mutations: 232
0
LTR73 149600370-149600926 | TFBS: 0 | Strand: -
LTR73 149600370-149600926 BLAT view
TFBS: 0   Strand: -   Mutations: 233
0
LTR73 159459232-159459795 | TFBS: 0 | Strand: +
LTR73 159459232-159459795 BLAT view
TFBS: 0   Strand: +   Mutations: 145
0
LTR73 169278464-169279044 | TFBS: 14 | Strand: +
LTR73 169278464-169279044 BLAT view
TFBS: 14   Strand: +   Mutations: 121
Brg1/169278238/169278582/607
CCNT2/169278354/169278670/481
TAL1_(SC-12984)/169278414/169278671/1000
GATA-1/169278415/169279056/708
GATA2_(CG2-96)/169278426/169278656/508
CEBPB/169278445/169278701/286
Pol2-4H8/169278457/169278701/318
Mxi1_(bHLH)/169278514/169278770/229
Pol2/169278537/169278987/182
TBP/169278548/169278818/32
Egr-1/169278575/169278791/102
SRF/169278613/169278836/1000
ELF1_(SC-631)/169278616/169278866/153
IRF1/169278854/169279094/314
LTR73 179224273-179224835 | TFBS: 0 | Strand: -
LTR73 179224273-179224835 BLAT view
TFBS: 0   Strand: -   Mutations: 143
0
LTR73 190559138-190559506 | TFBS: 0 | Strand: +
LTR73 190559138-190559506 BLAT view
TFBS: 0   Strand: +   Mutations: 185
0
LTR73 190561186-190561385 | TFBS: 0 | Strand: +
LTR73 190561186-190561385 BLAT view
TFBS: 0   Strand: +   Mutations: 270
0
LTR73 212287668-212287860 | TFBS: 0 | Strand: -
LTR73 212287668-212287860 BLAT view
TFBS: 0   Strand: -   Mutations: 188
0
LTR73 212288197-212288558 | TFBS: 0 | Strand: -
LTR73 212288197-212288558 BLAT view
TFBS: 0   Strand: -   Mutations: 188
0
LTR73 227124695-227125226 | TFBS: 0 | Strand: -
LTR73 227124695-227125226 BLAT view
TFBS: 0   Strand: -   Mutations: 169
0
LTR73 230865533-230865620 | TFBS: 1 | Strand: +
LTR73 230865533-230865620 BLAT view
TFBS: 1   Strand: +   Mutations: 64
TBP/230865459/230865729/62
LTR73 230866119-230866269 | TFBS: 0 | Strand: +
LTR73 230866119-230866269 BLAT view
TFBS: 0   Strand: +   Mutations: 173
0
LTR73 234496695-234497257 | TFBS: 4 | Strand: -
LTR73 234496695-234497257 BLAT view
TFBS: 4   Strand: -   Mutations: 175
eGFP-GATA2/234496827/234497211/386
YY1/234497011/234497160/254
eGFP-JunD/234497029/234497325/205
TAL1_(SC-12984)/234497087/234497263/428
LTR73 238295728-238296296 | TFBS: 0 | Strand: -
LTR73 238295728-238296296 BLAT view
TFBS: 0   Strand: -   Mutations: 171
0
LTR73 249077297-249077426 | TFBS: 0 | Strand: -
LTR73 249077297-249077426 BLAT view
TFBS: 0   Strand: -   Mutations: 139
0
TFBS+
LTR73 146849291-146849843 | TFBS: 17 | Strand: -
LTR73 146849291-146849843 BLAT view
TFBS: 17   Strand: -   Mutations: 111
PU.1/146849327/146849527/208
SRF/146849493/146849673/311
TBP/146849553/146849823/45
GATA-1/146849565/146850015/373
eGFP-GATA2/146849594/146849978/523
GATA-2/146849622/146849892/354
TAL1_(SC-12984)/146849623/146849931/1000
p300_(F-4)/146849626/146849902/650
Pol2(b)/146849632/146849988/334
Pol2-4H8/146849635/146849879/638
GATA2_(CG2-96)/146849647/146849877/844
Brg1/146849673/146850017/879
CCNT2/146849682/146849998/719
CEBPB/146849700/146849956/279
Pol2/146849704/146850114/593
eGFP-JunD/146849742/146850038/227
HMGN3/146849759/146850063/321
LTR73 169278464-169279044 | TFBS: 14 | Strand: +
LTR73 169278464-169279044 BLAT view
TFBS: 14   Strand: +   Mutations: 121
Brg1/169278238/169278582/607
CCNT2/169278354/169278670/481
TAL1_(SC-12984)/169278414/169278671/1000
GATA-1/169278415/169279056/708
GATA2_(CG2-96)/169278426/169278656/508
CEBPB/169278445/169278701/286
Pol2-4H8/169278457/169278701/318
Mxi1_(bHLH)/169278514/169278770/229
Pol2/169278537/169278987/182
TBP/169278548/169278818/32
Egr-1/169278575/169278791/102
SRF/169278613/169278836/1000
ELF1_(SC-631)/169278616/169278866/153
IRF1/169278854/169279094/314
LTR73 230865533-230865620 | TFBS: 1 | Strand: +
LTR73 230865533-230865620 BLAT view
TFBS: 1   Strand: +   Mutations: 64
TBP/230865459/230865729/62
LTR73 234496695-234497257 | TFBS: 4 | Strand: -
LTR73 234496695-234497257 BLAT view
TFBS: 4   Strand: -   Mutations: 175
eGFP-GATA2/234496827/234497211/386
YY1/234497011/234497160/254
eGFP-JunD/234497029/234497325/205
TAL1_(SC-12984)/234497087/234497263/428

refGene Track (genes view): On Off  

Show list of browser HERVs:

© 2012 Postparser.net | Andrew Garazha & Anton Buzdin | Cellgenetics.ru