Human LTR-retrotransposon genome browser

» Total HERV Statistics » HERV Genome Browser » TFBS dependence on HERV Divergence

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Choose repeat family:
Choose chromosome:
If you have specific coordinate input it here: or leave field blank.
31156328
0
249250622
Insertions
LTR71A 6812354-6812797 | TFBS: 1 | Strand: +
LTR71A 6812354-6812797 BLAT view
TFBS: 1   Strand: +   Mutations: 102
STAT2/6812401/6812685/118
LTR71A 6813161-6813191 | TFBS: 0 | Strand: -
LTR71A 6813161-6813191 BLAT view
TFBS: 0   Strand: -   Mutations: 33
0
LTR71A 71967750-71968211 | TFBS: 0 | Strand: +
LTR71A 71967750-71968211 BLAT view
TFBS: 0   Strand: +   Mutations: 89
0
LTR71A 71976097-71976550 | TFBS: 0 | Strand: +
LTR71A 71976097-71976550 BLAT view
TFBS: 0   Strand: +   Mutations: 98
0
LTR71A 73824788-73825252 | TFBS: 0 | Strand: +
LTR71A 73824788-73825252 BLAT view
TFBS: 0   Strand: +   Mutations: 98
0
LTR71A 89544637-89545086 | TFBS: 0 | Strand: -
LTR71A 89544637-89545086 BLAT view
TFBS: 0   Strand: -   Mutations: 109
0
LTR71A 99839732-99840190 | TFBS: 4 | Strand: +
LTR71A 99839732-99840190 BLAT view
TFBS: 4   Strand: +   Mutations: 83
STAT1/99839761/99840051/175
SRF/99839786/99839950/74
CEBPB/99839791/99840035/462
STAT2/99839842/99839940/300
LTR71A 105512309-105512770 | TFBS: 0 | Strand: +
LTR71A 105512309-105512770 BLAT view
TFBS: 0   Strand: +   Mutations: 79
0
LTR71A 173639983-173640472 | TFBS: 11 | Strand: -
LTR71A 173639983-173640472 BLAT view
TFBS: 11   Strand: -   Mutations: 184
STAT2/173640065/173640459/1000
STAT1/173640102/173640420/1000
CEBPB/173640108/173640364/132
p300_(F-4)/173640209/173640485/334
GATA-2/173640248/173640518/587
GATA-1/173640260/173640461/448
c-Myc/173640269/173640539/344
TAL1_(SC-12984)/173640271/173640500/724
Pol2-4H8/173640273/173640517/625
E2F6_(H-50)/173640313/173640454/272
E2F6/173640434/173640738/191
LTR71A 186216656-186217115 | TFBS: 0 | Strand: +
LTR71A 186216656-186217115 BLAT view
TFBS: 0   Strand: +   Mutations: 87
0
LTR71A 247381472-247381929 | TFBS: 2 | Strand: +
LTR71A 247381472-247381929 BLAT view
TFBS: 2   Strand: +   Mutations: 90
STAT1/247381489/247381779/187
STAT2/247381572/247381687/344
LTR71A 247516819-247517012 | TFBS: 0 | Strand: +
LTR71A 247516819-247517012 BLAT view
TFBS: 0   Strand: +   Mutations: 109
0
LTR71A 247517323-247517607 | TFBS: 0 | Strand: +
LTR71A 247517323-247517607 BLAT view
TFBS: 0   Strand: +   Mutations: 109
0
LTR71A 247523417-247523874 | TFBS: 8 | Strand: +
LTR71A 247523417-247523874 BLAT view
TFBS: 8   Strand: +   Mutations: 103
E2F6_(H-50)/247523390/247523590/81
STAT2/247523446/247523735/1000
STAT1/247523473/247523743/690
Pol2/247523544/247523994/127
NF-YB/247523563/247523847/76
PU.1/247523621/247523821/179
HEY1/247523658/247523898/146
Pol2-4H8/247523695/247523939/193
TFBS+
LTR71A 6812354-6812797 | TFBS: 1 | Strand: +
LTR71A 6812354-6812797 BLAT view
TFBS: 1   Strand: +   Mutations: 102
STAT2/6812401/6812685/118
LTR71A 99839732-99840190 | TFBS: 4 | Strand: +
LTR71A 99839732-99840190 BLAT view
TFBS: 4   Strand: +   Mutations: 83
STAT1/99839761/99840051/175
SRF/99839786/99839950/74
CEBPB/99839791/99840035/462
STAT2/99839842/99839940/300
LTR71A 173639983-173640472 | TFBS: 11 | Strand: -
LTR71A 173639983-173640472 BLAT view
TFBS: 11   Strand: -   Mutations: 184
STAT2/173640065/173640459/1000
STAT1/173640102/173640420/1000
CEBPB/173640108/173640364/132
p300_(F-4)/173640209/173640485/334
GATA-2/173640248/173640518/587
GATA-1/173640260/173640461/448
c-Myc/173640269/173640539/344
TAL1_(SC-12984)/173640271/173640500/724
Pol2-4H8/173640273/173640517/625
E2F6_(H-50)/173640313/173640454/272
E2F6/173640434/173640738/191
LTR71A 247381472-247381929 | TFBS: 2 | Strand: +
LTR71A 247381472-247381929 BLAT view
TFBS: 2   Strand: +   Mutations: 90
STAT1/247381489/247381779/187
STAT2/247381572/247381687/344
LTR71A 247523417-247523874 | TFBS: 8 | Strand: +
LTR71A 247523417-247523874 BLAT view
TFBS: 8   Strand: +   Mutations: 103
E2F6_(H-50)/247523390/247523590/81
STAT2/247523446/247523735/1000
STAT1/247523473/247523743/690
Pol2/247523544/247523994/127
NF-YB/247523563/247523847/76
PU.1/247523621/247523821/179
HEY1/247523658/247523898/146
Pol2-4H8/247523695/247523939/193

refGene Track (genes view): On Off  

Show list of browser HERVs:

© 2012 Postparser.net | Andrew Garazha & Anton Buzdin | Cellgenetics.ru