HERV genome browser

31156328

249250622

Insertions

LTR5B 3666964-3667954 | TFBS: 1 | Strand: +

LTR5B 3666964-3667954 BLAT view
TFBS: 1 Strand: + Mutations: 144
GATA-1/3667242/3667888/725

LTR5B 5633660-5634670 | TFBS: 0 | Strand: -

LTR5B 5633660-5634670 BLAT view
TFBS: 0 Strand: - Mutations: 51
0

LTR5B 9061878-9062867 | TFBS: 5 | Strand: +

LTR5B 9061878-9062867 BLAT view
TFBS: 5 Strand: + Mutations: 130
FOSL2/9061656/9061892/135
FOXA1_(SC-101058)/9061906/9062176/233
FOXA1_(C-20)/9061932/9062192/217
FOXA2_(SC-6554)/9061968/9062089/275
GR/9062303/9062559/607

LTR5B 11949922-11950468 | TFBS: 0 | Strand: +

LTR5B 11949922-11950468 BLAT view
TFBS: 0 Strand: + Mutations: 143
0

LTR5B 11950755-11951215 | TFBS: 0 | Strand: +

LTR5B 11950755-11951215 BLAT view
TFBS: 0 Strand: + Mutations: 143
0

LTR5B 12845092-12846078 | TFBS: 1 | Strand: -

LTR5B 12845092-12846078 BLAT view
TFBS: 1 Strand: - Mutations: 85
SETDB1/12844853/12845303/377

LTR5B 13154460-13154568 | TFBS: 0 | Strand: +

LTR5B 13154460-13154568 BLAT view
TFBS: 0 Strand: + Mutations: 93
0

LTR5B 13180992-13181850 | TFBS: 1 | Strand: +

LTR5B 13180992-13181850 BLAT view
TFBS: 1 Strand: + Mutations: 76
PU.1/13181400/13181456/252

LTR5B 13207133-13207241 | TFBS: 0 | Strand: -

LTR5B 13207133-13207241 BLAT view
TFBS: 0 Strand: - Mutations: 93
0

LTR5B 13458304-13459295 | TFBS: 0 | Strand: +

LTR5B 13458304-13459295 BLAT view
TFBS: 0 Strand: + Mutations: 85
0

LTR5B 13466828-13467826 | TFBS: 0 | Strand: +

LTR5B 13466828-13467826 BLAT view
TFBS: 0 Strand: + Mutations: 66
0

LTR5B 13679140-13680131 | TFBS: 0 | Strand: +

LTR5B 13679140-13680131 BLAT view
TFBS: 0 Strand: + Mutations: 85
0

LTR5B 13687664-13688662 | TFBS: 0 | Strand: +

LTR5B 13687664-13688662 BLAT view
TFBS: 0 Strand: + Mutations: 67
0

LTR5B 20356520-20357508 | TFBS: 1 | Strand: -

LTR5B 20356520-20357508 BLAT view
TFBS: 1 Strand: - Mutations: 144
PU.1/20356958/20357158/230

LTR5B 31372847-31372925 | TFBS: 1 | Strand: -

LTR5B 31372847-31372925 BLAT view
TFBS: 1 Strand: - Mutations: 64
CEBPB/31372887/31373143/95

LTR5B 33533971-33534293 | TFBS: 0 | Strand: +

LTR5B 33533971-33534293 BLAT view
TFBS: 0 Strand: + Mutations: 137
0

LTR5B 38025275-38026265 | TFBS: 4 | Strand: -

LTR5B 38025275-38026265 BLAT view
TFBS: 4 Strand: - Mutations: 52
TAL1_(SC-12984)/38025665/38025915/58
PU.1/38025695/38025909/1000
ZBTB7A_(SC-34508)/38025707/38025917/530
USF-1/38025808/38026058/104

LTR5B 39969805-39970204 | TFBS: 0 | Strand: -

LTR5B 39969805-39970204 BLAT view
TFBS: 0 Strand: - Mutations: 124
0

LTR5B 39970272-39971253 | TFBS: 3 | Strand: -

LTR5B 39970272-39971253 BLAT view
TFBS: 3 Strand: - Mutations: 149
FOXA1_(SC-101058)/39970941/39971211/254
FOXA2_(SC-6554)/39970967/39971191/157
FOXA1_(C-20)/39971036/39971143/215

LTR5B 46861535-46862514 | TFBS: 2 | Strand: -

LTR5B 46861535-46862514 BLAT view
TFBS: 2 Strand: - Mutations: 144
PU.1/46861982/46862182/249
FOXA1_(C-20)/46862252/46862476/337

LTR5B 60380016-60381038 | TFBS: 0 | Strand: +

LTR5B 60380016-60381038 BLAT view
TFBS: 0 Strand: + Mutations: 66
0

LTR5B 60403830-60404837 | TFBS: 0 | Strand: -

LTR5B 60403830-60404837 BLAT view
TFBS: 0 Strand: - Mutations: 45
0

LTR5B 62636648-62637639 | TFBS: 0 | Strand: -

LTR5B 62636648-62637639 BLAT view
TFBS: 0 Strand: - Mutations: 63
0

LTR5B 67057250-67058236 | TFBS: 6 | Strand: -

LTR5B 67057250-67058236 BLAT view
TFBS: 6 Strand: - Mutations: 144
PU.1/67057663/67057863/131
p300/67057883/67058167/245
SP1/67057941/67058221/273
FOXA1_(SC-101058)/67057960/67058113/481
FOXA1_(C-20)/67057965/67058117/389
FOXA2_(SC-6554)/67057980/67058106/392

LTR5B 82689161-82689206 | TFBS: 0 | Strand: -

LTR5B 82689161-82689206 BLAT view
TFBS: 0 Strand: - Mutations: 67
0

LTR5B 99508571-99508712 | TFBS: 0 | Strand: +

LTR5B 99508571-99508712 BLAT view
TFBS: 0 Strand: + Mutations: 43
0

LTR5B 100259110-100260111 | TFBS: 2 | Strand: -

LTR5B 100259110-100260111 BLAT view
TFBS: 2 Strand: - Mutations: 65
EBF1_(C-8)/100259479/100259715/99
PU.1/100259508/100259739/326

LTR5B 110309237-110310236 | TFBS: 2 | Strand: +

LTR5B 110309237-110310236 BLAT view
TFBS: 2 Strand: + Mutations: 106
PU.1/110309613/110309813/253
GATA-1/110309682/110309949/602

LTR5B 111904037-111905005 | TFBS: 1 | Strand: -

LTR5B 111904037-111905005 BLAT view
TFBS: 1 Strand: - Mutations: 86
PU.1/111904487/111904687/285

LTR5B 151844984-151845971 | TFBS: 2 | Strand: +

LTR5B 151844984-151845971 BLAT view
TFBS: 2 Strand: + Mutations: 97
PU.1/151845323/151845523/316
CTCF_(SC-5916)/151845327/151845531/87

LTR5B 160916693-160917688 | TFBS: 1 | Strand: -

LTR5B 160916693-160917688 BLAT view
TFBS: 1 Strand: - Mutations: 120
GATA-1/160916843/160917293/154

LTR5B 161380761-161380854 | TFBS: 1 | Strand: -

LTR5B 161380761-161380854 BLAT view
TFBS: 1 Strand: - Mutations: 100
GATA-1/161380324/161380774/204

LTR5B 161382200-161382313 | TFBS: 0 | Strand: +

LTR5B 161382200-161382313 BLAT view
TFBS: 0 Strand: + Mutations: 136
0

LTR5B 161382608-161383410 | TFBS: 1 | Strand: +

LTR5B 161382608-161383410 BLAT view
TFBS: 1 Strand: + Mutations: 136
PU.1/161382790/161382990/139

LTR5B 165061819-165062795 | TFBS: 6 | Strand: +

LTR5B 165061819-165062795 BLAT view
TFBS: 6 Strand: + Mutations: 140
GR/165061840/165062128/159
p300/165061851/165062135/148
FOXA1_(C-20)/165061956/165062089/201
FOXA2_(SC-6554)/165061963/165062083/242
FOXA1_(SC-101058)/165061965/165062087/314
PU.1/165062215/165062415/128

LTR5B 166574602-166575592 | TFBS: 1 | Strand: -

LTR5B 166574602-166575592 BLAT view
TFBS: 1 Strand: - Mutations: 56
PU.1/166575016/166575216/213

LTR5B 166579268-166580258 | TFBS: 2 | Strand: -

LTR5B 166579268-166580258 BLAT view
TFBS: 2 Strand: - Mutations: 69
PU.1/166579745/166579843/378
NRSF/166579817/166580001/42

LTR5B 173443563-173444547 | TFBS: 12 | Strand: +

LTR5B 173443563-173444547 BLAT view
TFBS: 12 Strand: + Mutations: 135
MafK_(ab50322)/173443451/173443691/102
FOXA1_(C-20)/173443590/173443850/175
FOXA1_(SC-101058)/173443649/173443775/340
FOXA2_(SC-6554)/173443654/173443803/374
HEY1/173443675/173443905/99
PU.1/173443966/173444084/513
HNF4A_(H-171)/173444179/173444419/218
GATA-2/173444286/173444450/603
FOXA2_(SC-6554)/173444291/173444436/278
FOXA1_(C-20)/173444293/173444443/333
FOXA1_(SC-101058)/173444303/173444441/297
HEY1/173444311/173444541/103

LTR5B 198098813-198099807 | TFBS: 1 | Strand: -

LTR5B 198098813-198099807 BLAT view
TFBS: 1 Strand: - Mutations: 44
PU.1/198099256/198099456/163

LTR5B 211395473-211396442 | TFBS: 11 | Strand: -

LTR5B 211395473-211396442 BLAT view
TFBS: 11 Strand: - Mutations: 146
GATA-1/211395773/211396049/387
Pol2(b)/211395776/211396132/366
Pol2-4H8/211395835/211396079/786
GABP/211395866/211396136/71
TAL1_(SC-12984)/211395875/211396156/1000
GATA-2/211395875/211396145/1000
PU.1/211395879/211396000/569
USF-1/211395884/211396134/89
NRSF/211395910/211396094/55
SRF/211395918/211396098/206
GATA2_(CG2-96)/211395926/211395988/1000

LTR5B 219791920-219792911 | TFBS: 0 | Strand: -

LTR5B 219791920-219792911 BLAT view
TFBS: 0 Strand: - Mutations: 50
0

LTR5B 225414304-225415293 | TFBS: 0 | Strand: -

LTR5B 225414304-225415293 BLAT view
TFBS: 0 Strand: - Mutations: 132
0

LTR5B 227793716-227794722 | TFBS: 0 | Strand: -

LTR5B 227793716-227794722 BLAT view
TFBS: 0 Strand: - Mutations: 120
0

LTR5B 234147555-234148565 | TFBS: 0 | Strand: -

LTR5B 234147555-234148565 BLAT view
TFBS: 0 Strand: - Mutations: 58
0

LTR5B 238925594-238926588 | TFBS: 0 | Strand: -

LTR5B 238925594-238926588 BLAT view
TFBS: 0 Strand: - Mutations: 86
0

LTR5B 241410706-241410769 | TFBS: 0 | Strand: -

LTR5B 241410706-241410769 BLAT view
TFBS: 0 Strand: - Mutations: 65
0

LTR5B 247745311-247746300 | TFBS: 0 | Strand: +

LTR5B 247745311-247746300 BLAT view
TFBS: 0 Strand: + Mutations: 140
0

LTR5B 249201113-249202107 | TFBS: 8 | Strand: -

LTR5B 249201113-249202107 BLAT view
TFBS: 8 Strand: - Mutations: 71
Pol2/249200852/249201462/806
HEY1/249200898/249201138/317
Pol2-4H8/249200904/249201168/355
ZBTB7A_(SC-34508)/249200905/249201115/316
TBP/249200906/249201196/56
TAF1/249200943/249201238/496
EBF/249201102/249201366/258
EBF1_(C-8)/249201135/249201328/356

TFBS+