HERV genome browser

31156328

249250622

Insertions

LTR55 14500649-14501170 | TFBS: 0 | Strand: -

LTR55 14500649-14501170 BLAT view
TFBS: 0 Strand: - Mutations: 196
0

LTR55 48642863-48643396 | TFBS: 13 | Strand: -

LTR55 48642863-48643396 BLAT view
TFBS: 13 Strand: - Mutations: 221
CTCF/48642751/48643132/214
eGFP-GATA2/48642870/48643254/514
GATA-1/48642915/48643365/218
GATA-2/48642961/48643231/608
Pol2(b)/48642976/48643332/451
GABP/48642991/48643261/30
HDAC2_(SC-6296)/48643005/48643209/877
CCNT2/48643006/48643322/601
TAL1_(SC-12984)/48643034/48643306/996
Pol2-4H8/48643038/48643282/794
GATA2_(CG2-96)/48643050/48643280/878
NRSF/48643067/48643251/19
CEBPB/48643082/48643338/89

LTR55 70202611-70202836 | TFBS: 0 | Strand: +

LTR55 70202611-70202836 BLAT view
TFBS: 0 Strand: + Mutations: 265
0

LTR55 70203203-70203507 | TFBS: 8 | Strand: +

LTR55 70203203-70203507 BLAT view
TFBS: 8 Strand: + Mutations: 265
SETDB1/70203143/70203593/245
CTCF/70203286/70203812/1000
SMC3_(ab9263)/70203306/70203579/717
Rad21/70203323/70203565/1000
CTCF_(SC-5916)/70203328/70203544/475
CEBPB/70203329/70203585/977
TAF7_(SQ-8)/70203380/70203584/104
CTCF_(C-20)/70203388/70203534/580

LTR55 73552306-73552845 | TFBS: 0 | Strand: -

LTR55 73552306-73552845 BLAT view
TFBS: 0 Strand: - Mutations: 251
0

LTR55 103111689-103112212 | TFBS: 0 | Strand: +

LTR55 103111689-103112212 BLAT view
TFBS: 0 Strand: + Mutations: 212
0

LTR55 113419492-113419765 | TFBS: 0 | Strand: -

LTR55 113419492-113419765 BLAT view
TFBS: 0 Strand: - Mutations: 259
0

LTR55 113420065-113420327 | TFBS: 0 | Strand: -

LTR55 113420065-113420327 BLAT view
TFBS: 0 Strand: - Mutations: 259
0

LTR55 120478741-120479271 | TFBS: 0 | Strand: -

LTR55 120478741-120479271 BLAT view
TFBS: 0 Strand: - Mutations: 188
0

LTR55 154601530-154602079 | TFBS: 10 | Strand: -

LTR55 154601530-154602079 BLAT view
TFBS: 10 Strand: - Mutations: 212
GATA-1/154601563/154602114/1000
PU.1/154601567/154601767/242
NRSF/154601691/154601875/18
SETDB1/154601692/154602535/616
eGFP-JunB/154601708/154601998/321
eGFP-GATA2/154601712/154602096/663
eGFP-JunD/154601716/154602012/248
GATA2_(CG2-96)/154601748/154601978/324
TAL1_(SC-12984)/154601753/154601994/854
CCNT2/154601780/154602096/495

LTR55 192077195-192077717 | TFBS: 13 | Strand: -

LTR55 192077195-192077717 BLAT view
TFBS: 13 Strand: - Mutations: 189
GATA-1/192077191/192077776/1000
CTCF/192077194/192077564/107
CEBPB/192077213/192077469/140
eGFP-GATA2/192077229/192077613/328
GATA-2/192077342/192077612/533
NRSF/192077352/192077536/32
GABP/192077355/192077625/22
SP1/192077366/192077606/182
GATA2_(CG2-96)/192077373/192077603/522
Egr-1/192077373/192077589/427
TAL1_(SC-12984)/192077376/192077610/973
TAF1/192077381/192077631/316
Pol2-4H8/192077455/192077527/982

LTR55 195948961-195949455 | TFBS: 0 | Strand: -

LTR55 195948961-195949455 BLAT view
TFBS: 0 Strand: - Mutations: 235
0

LTR55 196026087-196026627 | TFBS: 1 | Strand: -

LTR55 196026087-196026627 BLAT view
TFBS: 1 Strand: - Mutations: 241
RXRA/196026137/196026333/416

LTR55 220847409-220847940 | TFBS: 0 | Strand: -

LTR55 220847409-220847940 BLAT view
TFBS: 0 Strand: - Mutations: 237
0

LTR55 223265799-223266101 | TFBS: 0 | Strand: +

LTR55 223265799-223266101 BLAT view
TFBS: 0 Strand: + Mutations: 208
0

LTR55 223266353-223266569 | TFBS: 0 | Strand: +

LTR55 223266353-223266569 BLAT view
TFBS: 0 Strand: + Mutations: 217
0

LTR55 238237666-238237708 | TFBS: 0 | Strand: +

LTR55 238237666-238237708 BLAT view
TFBS: 0 Strand: + Mutations: 270
0

LTR55 238240041-238240511 | TFBS: 0 | Strand: +

LTR55 238240041-238240511 BLAT view
TFBS: 0 Strand: + Mutations: 270
0

LTR55 238415754-238416328 | TFBS: 9 | Strand: -

LTR55 238415754-238416328 BLAT view
TFBS: 9 Strand: - Mutations: 238
CTCF/238415595/238415968/679
Rad21/238415683/238415939/525
SMC3_(ab9263)/238415689/238415929/389
CTCF_(SC-5916)/238415703/238415925/379
Znf143_(16618-1-AP)/238415716/238415920/61
NFKB/238415719/238416019/229
YY1_(C-20)/238415746/238416010/106
CTCF_(C-20)/238415761/238415855/447
BCL3/238415792/238415972/826

LTR55 239403164-239403371 | TFBS: 0 | Strand: +

LTR55 239403164-239403371 BLAT view
TFBS: 0 Strand: + Mutations: 206
0

LTR55 239403433-239403499 | TFBS: 0 | Strand: +

LTR55 239403433-239403499 BLAT view
TFBS: 0 Strand: + Mutations: 197
0

LTR55 239404208-239404325 | TFBS: 0 | Strand: +

LTR55 239404208-239404325 BLAT view
TFBS: 0 Strand: + Mutations: 261
0

LTR55 241648681-241649251 | TFBS: 19 | Strand: +

LTR55 241648681-241649251 BLAT view
TFBS: 19 Strand: + Mutations: 205
PAX5-N19/241648483/241648743/380
PAX5-C20/241648493/241648717/592
MEF2A/241648503/241648759/303
BATF/241648574/241648732/555
GATA-1/241648764/241649214/181
TAL1_(SC-12984)/241648800/241649050/209
GATA2_(CG2-96)/241648819/241649049/160
Pol2-4H8/241648824/241649068/193
eGFP-JunB/241648837/241649127/607
eGFP-FOS/241648838/241649088/361
FOSL1_(SC-183)/241648841/241649057/260
ZBTB7A_(SC-34508)/241648843/241649053/374
eGFP-JunD/241648849/241649145/358
NFKB/241648946/241649256/427
CTCF/241649032/241649392/587
SMC3_(ab9263)/241649056/241649322/460
Rad21/241649058/241649321/304
CTCF_(SC-5916)/241649070/241649292/178
CTCF_(C-20)/241649168/241649221/315

LTR55 242965272-242965790 | TFBS: 0 | Strand: -

LTR55 242965272-242965790 BLAT view
TFBS: 0 Strand: - Mutations: 188
0

LTR55 247893457-247893678 | TFBS: 0 | Strand: +

LTR55 247893457-247893678 BLAT view
TFBS: 0 Strand: + Mutations: 198
0

TFBS+