HERV genome browser

31156328

249250622

Insertions

LTR54 168951609-168952058 | TFBS: 0 | Strand: +

LTR54 168951609-168952058 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR54 5128874-5129401 | TFBS: 0 | Strand: -

LTR54 5128874-5129401 BLAT view
TFBS: 0 Strand: - Mutations: 167
0

LTR54 8782071-8782256 | TFBS: 2 | Strand: +

LTR54 8782071-8782256 BLAT view
TFBS: 2 Strand: + Mutations: 96
Pol2-4H8/8781847/8782091/483
CEBPB/8782051/8782307/230

LTR54 9707479-9707539 | TFBS: 0 | Strand: -

LTR54 9707479-9707539 BLAT view
TFBS: 0 Strand: - Mutations: 150
0

LTR54 22401217-22401724 | TFBS: 2 | Strand: -

LTR54 22401217-22401724 BLAT view
TFBS: 2 Strand: - Mutations: 181
PU.1/22401500/22401747/113
EBF/22401523/22401787/78

LTR54 24247413-24247629 | TFBS: 4 | Strand: +

LTR54 24247413-24247629 BLAT view
TFBS: 4 Strand: + Mutations: 172
Brg1/24247069/24247413/508
TAL1_(SC-12984)/24247405/24247655/76
GATA-1/24247431/24247685/368
E2F6_(H-50)/24247466/24247523/178

LTR54 24248401-24248607 | TFBS: 0 | Strand: +

LTR54 24248401-24248607 BLAT view
TFBS: 0 Strand: + Mutations: 142
0

LTR54 26455584-26455810 | TFBS: 0 | Strand: -

LTR54 26455584-26455810 BLAT view
TFBS: 0 Strand: - Mutations: 177
0

LTR54 26456328-26456572 | TFBS: 0 | Strand: -

LTR54 26456328-26456572 BLAT view
TFBS: 0 Strand: - Mutations: 171
0

LTR54 31628651-31628976 | TFBS: 1 | Strand: +

LTR54 31628651-31628976 BLAT view
TFBS: 1 Strand: + Mutations: 174
HA-E2F1/31628243/31628693/480

LTR54 31630640-31630823 | TFBS: 0 | Strand: +

LTR54 31630640-31630823 BLAT view
TFBS: 0 Strand: + Mutations: 175
0

LTR54 35498293-35498850 | TFBS: 0 | Strand: -

LTR54 35498293-35498850 BLAT view
TFBS: 0 Strand: - Mutations: 173
0

LTR54 36863948-36863974 | TFBS: 0 | Strand: +

LTR54 36863948-36863974 BLAT view
TFBS: 0 Strand: + Mutations: 142
0

LTR54 36864272-36864666 | TFBS: 2 | Strand: +

LTR54 36864272-36864666 BLAT view
TFBS: 2 Strand: + Mutations: 119
ELF1_(SC-631)/36864071/36864321/119
eGFP-JunD/36864197/36864493/355

LTR54 40491094-40491170 | TFBS: 0 | Strand: -

LTR54 40491094-40491170 BLAT view
TFBS: 0 Strand: - Mutations: 92
0

LTR54 44666919-44667004 | TFBS: 0 | Strand: -

LTR54 44666919-44667004 BLAT view
TFBS: 0 Strand: - Mutations: 129
0

LTR54 45895238-45895763 | TFBS: 3 | Strand: +

LTR54 45895238-45895763 BLAT view
TFBS: 3 Strand: + Mutations: 209
eGFP-GATA2/45895202/45895586/462
GATA-1/45895205/45895655/224
MEF2A/45895536/45895792/302

LTR54 46337045-46337402 | TFBS: 8 | Strand: +

LTR54 46337045-46337402 BLAT view
TFBS: 8 Strand: + Mutations: 181
p300/46337161/46337445/265
MafK_(ab50322)/46337184/46337361/782
MafF_(M8194)/46337189/46337361/722
FOXA1_(SC-101058)/46337189/46337459/245
TCF4/46337206/46337590/124
FOXA2_(SC-6554)/46337217/46337441/253
FOXA1_(C-20)/46337218/46337478/164
MafK_(SC-477)/46337257/46337334/1000

LTR54 50859390-50859890 | TFBS: 1 | Strand: +

LTR54 50859390-50859890 BLAT view
TFBS: 1 Strand: + Mutations: 180
YY1_(C-20)/50859312/50859576/133

LTR54 59646471-59646896 | TFBS: 0 | Strand: -

LTR54 59646471-59646896 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR54 62184104-62184151 | TFBS: 0 | Strand: +

LTR54 62184104-62184151 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR54 67731974-67732017 | TFBS: 0 | Strand: -

LTR54 67731974-67732017 BLAT view
TFBS: 0 Strand: - Mutations: 70
0

LTR54 67732481-67732584 | TFBS: 0 | Strand: -

LTR54 67732481-67732584 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR54 67732584-67732798 | TFBS: 0 | Strand: -

LTR54 67732584-67732798 BLAT view
TFBS: 0 Strand: - Mutations: 123
0

LTR54 68388701-68389020 | TFBS: 0 | Strand: -

LTR54 68388701-68389020 BLAT view
TFBS: 0 Strand: - Mutations: 189
0

LTR54 70740924-70741348 | TFBS: 0 | Strand: -

LTR54 70740924-70741348 BLAT view
TFBS: 0 Strand: - Mutations: 222
0

LTR54 78004585-78004660 | TFBS: 1 | Strand: -

LTR54 78004585-78004660 BLAT view
TFBS: 1 Strand: - Mutations: 107
PU.1/78004632/78004862/249

LTR54 78004859-78004950 | TFBS: 7 | Strand: -

LTR54 78004859-78004950 BLAT view
TFBS: 7 Strand: - Mutations: 154
PU.1/78004632/78004862/249
TCF12/78004670/78004886/306
PAX5-C20/78004674/78004898/196
GR/78004688/78004958/249
FOXA1_(C-20)/78004692/78004880/549
FOXA1_(SC-101058)/78004697/78004888/663
CEBPB/78004930/78005174/116

LTR54 78592917-78593335 | TFBS: 0 | Strand: -

LTR54 78592917-78593335 BLAT view
TFBS: 0 Strand: - Mutations: 132
0

LTR54 80310461-80310901 | TFBS: 0 | Strand: -

LTR54 80310461-80310901 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR54 81542251-81542451 | TFBS: 0 | Strand: -

LTR54 81542251-81542451 BLAT view
TFBS: 0 Strand: - Mutations: 240
0

LTR54 81542483-81542592 | TFBS: 0 | Strand: -

LTR54 81542483-81542592 BLAT view
TFBS: 0 Strand: - Mutations: 182
0

LTR54 82106017-82106037 | TFBS: 0 | Strand: +

LTR54 82106017-82106037 BLAT view
TFBS: 0 Strand: + Mutations: 179
0

LTR54 82106357-82106837 | TFBS: 0 | Strand: +

LTR54 82106357-82106837 BLAT view
TFBS: 0 Strand: + Mutations: 179
0

LTR54 85865150-85865677 | TFBS: 0 | Strand: +

LTR54 85865150-85865677 BLAT view
TFBS: 0 Strand: + Mutations: 164
0

LTR54 93530488-93530507 | TFBS: 0 | Strand: -

LTR54 93530488-93530507 BLAT view
TFBS: 0 Strand: - Mutations: 241
0

LTR54 93530817-93531020 | TFBS: 0 | Strand: -

LTR54 93530817-93531020 BLAT view
TFBS: 0 Strand: - Mutations: 241
0

LTR54 93531062-93531115 | TFBS: 0 | Strand: -

LTR54 93531062-93531115 BLAT view
TFBS: 0 Strand: - Mutations: 154
0

LTR54 95192131-95192564 | TFBS: 0 | Strand: -

LTR54 95192131-95192564 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR54 96937530-96938037 | TFBS: 0 | Strand: -

LTR54 96937530-96938037 BLAT view
TFBS: 0 Strand: - Mutations: 219
0

LTR54 99447800-99448263 | TFBS: 3 | Strand: +

LTR54 99447800-99448263 BLAT view
TFBS: 3 Strand: + Mutations: 114
c-Fos/99447504/99447848/631
JunD/99447541/99447801/525
c-Jun/99447544/99447840/316

LTR54 99455102-99455532 | TFBS: 0 | Strand: +

LTR54 99455102-99455532 BLAT view
TFBS: 0 Strand: + Mutations: 128
0

LTR54 102150318-102150754 | TFBS: 0 | Strand: +

LTR54 102150318-102150754 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR54 107126862-107127297 | TFBS: 0 | Strand: +

LTR54 107126862-107127297 BLAT view
TFBS: 0 Strand: + Mutations: 126
0

LTR54 113422882-113423317 | TFBS: 0 | Strand: -

LTR54 113422882-113423317 BLAT view
TFBS: 0 Strand: - Mutations: 184
0

LTR54 115002402-115002484 | TFBS: 0 | Strand: +

LTR54 115002402-115002484 BLAT view
TFBS: 0 Strand: + Mutations: 100
0

LTR54 115003036-115003182 | TFBS: 0 | Strand: +

LTR54 115003036-115003182 BLAT view
TFBS: 0 Strand: + Mutations: 179
0

LTR54 115003248-115003530 | TFBS: 0 | Strand: +

LTR54 115003248-115003530 BLAT view
TFBS: 0 Strand: + Mutations: 162
0

LTR54 115038056-115038098 | TFBS: 0 | Strand: -

LTR54 115038056-115038098 BLAT view
TFBS: 0 Strand: - Mutations: 143
0

LTR54 115788098-115788148 | TFBS: 1 | Strand: -

LTR54 115788098-115788148 BLAT view
TFBS: 1 Strand: - Mutations: 82
SETDB1/115787851/115788301/345

LTR54 151890491-151890989 | TFBS: 0 | Strand: +

LTR54 151890491-151890989 BLAT view
TFBS: 0 Strand: + Mutations: 143
0

LTR54 151903152-151903387 | TFBS: 0 | Strand: -

LTR54 151903152-151903387 BLAT view
TFBS: 0 Strand: - Mutations: 157
0

LTR54 160333265-160333343 | TFBS: 0 | Strand: +

LTR54 160333265-160333343 BLAT view
TFBS: 0 Strand: + Mutations: 173
0

LTR54 161487092-161487558 | TFBS: 0 | Strand: -

LTR54 161487092-161487558 BLAT view
TFBS: 0 Strand: - Mutations: 178
0

LTR54 161568745-161569213 | TFBS: 0 | Strand: -

LTR54 161568745-161569213 BLAT view
TFBS: 0 Strand: - Mutations: 159
0

LTR54 166502752-166502833 | TFBS: 0 | Strand: -

LTR54 166502752-166502833 BLAT view
TFBS: 0 Strand: - Mutations: 123
0

LTR54 166511168-166511326 | TFBS: 0 | Strand: -

LTR54 166511168-166511326 BLAT view
TFBS: 0 Strand: - Mutations: 185
0

LTR54 167205079-167205156 | TFBS: 0 | Strand: -

LTR54 167205079-167205156 BLAT view
TFBS: 0 Strand: - Mutations: 169
0

LTR54 168951301-168951330 | TFBS: 0 | Strand: +

LTR54 168951301-168951330 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR54 169046327-169046838 | TFBS: 0 | Strand: +

LTR54 169046327-169046838 BLAT view
TFBS: 0 Strand: + Mutations: 167
0

LTR54 169163531-169163960 | TFBS: 0 | Strand: +

LTR54 169163531-169163960 BLAT view
TFBS: 0 Strand: + Mutations: 120
0

LTR54 169204061-169204335 | TFBS: 1 | Strand: -

LTR54 169204061-169204335 BLAT view
TFBS: 1 Strand: - Mutations: 189
FOXA1_(SC-101058)/169204105/169204375/129

LTR54 171937424-171937850 | TFBS: 0 | Strand: -

LTR54 171937424-171937850 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR54 173072152-173072225 | TFBS: 1 | Strand: -

LTR54 173072152-173072225 BLAT view
TFBS: 1 Strand: - Mutations: 208
SETDB1/173072116/173072566/295

LTR54 175797982-175798457 | TFBS: 0 | Strand: -

LTR54 175797982-175798457 BLAT view
TFBS: 0 Strand: - Mutations: 122
0

LTR54 176193245-176193540 | TFBS: 0 | Strand: +

LTR54 176193245-176193540 BLAT view
TFBS: 0 Strand: + Mutations: 193
0

LTR54 176193747-176193915 | TFBS: 0 | Strand: +

LTR54 176193747-176193915 BLAT view
TFBS: 0 Strand: + Mutations: 120
0

LTR54 176196633-176197074 | TFBS: 0 | Strand: -

LTR54 176196633-176197074 BLAT view
TFBS: 0 Strand: - Mutations: 228
0

LTR54 180128573-180128998 | TFBS: 0 | Strand: -

LTR54 180128573-180128998 BLAT view
TFBS: 0 Strand: - Mutations: 137
0

LTR54 183315547-183315987 | TFBS: 0 | Strand: +

LTR54 183315547-183315987 BLAT view
TFBS: 0 Strand: + Mutations: 132
0

LTR54 185048407-185048787 | TFBS: 0 | Strand: +

LTR54 185048407-185048787 BLAT view
TFBS: 0 Strand: + Mutations: 169
0

LTR54 185049074-185049117 | TFBS: 0 | Strand: +

LTR54 185049074-185049117 BLAT view
TFBS: 0 Strand: + Mutations: 169
0

LTR54 185306413-185306656 | TFBS: 0 | Strand: -

LTR54 185306413-185306656 BLAT view
TFBS: 0 Strand: - Mutations: 162
0

LTR54 185307392-185307587 | TFBS: 0 | Strand: -

LTR54 185307392-185307587 BLAT view
TFBS: 0 Strand: - Mutations: 181
0

LTR54 185310356-185310799 | TFBS: 0 | Strand: -

LTR54 185310356-185310799 BLAT view
TFBS: 0 Strand: - Mutations: 169
0

LTR54 186581315-186581785 | TFBS: 0 | Strand: -

LTR54 186581315-186581785 BLAT view
TFBS: 0 Strand: - Mutations: 206
0

LTR54 191874243-191874758 | TFBS: 0 | Strand: +

LTR54 191874243-191874758 BLAT view
TFBS: 0 Strand: + Mutations: 185
0

LTR54 193476491-193476749 | TFBS: 0 | Strand: -

LTR54 193476491-193476749 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR54 193476760-193476893 | TFBS: 0 | Strand: -

LTR54 193476760-193476893 BLAT view
TFBS: 0 Strand: - Mutations: 197
0

LTR54 198098506-198098813 | TFBS: 0 | Strand: +

LTR54 198098506-198098813 BLAT view
TFBS: 0 Strand: + Mutations: 161
0

LTR54 198099807-198099905 | TFBS: 0 | Strand: +

LTR54 198099807-198099905 BLAT view
TFBS: 0 Strand: + Mutations: 106
0

LTR54 200855821-200856274 | TFBS: 3 | Strand: +

LTR54 200855821-200856274 BLAT view
TFBS: 3 Strand: + Mutations: 136
YY1/200855753/200856089/222
TAL1_(SC-12984)/200855862/200856112/95
GATA2_(CG2-96)/200855870/200856100/116

LTR54 204857411-204857742 | TFBS: 1 | Strand: -

LTR54 204857411-204857742 BLAT view
TFBS: 1 Strand: - Mutations: 120
MafK_(ab50322)/204857516/204857756/106

LTR54 207006437-207006881 | TFBS: 1 | Strand: -

LTR54 207006437-207006881 BLAT view
TFBS: 1 Strand: - Mutations: 130
MEF2A/207006453/207006709/245

LTR54 208974544-208974745 | TFBS: 0 | Strand: +

LTR54 208974544-208974745 BLAT view
TFBS: 0 Strand: + Mutations: 201
0

LTR54 212628618-212628796 | TFBS: 0 | Strand: +

LTR54 212628618-212628796 BLAT view
TFBS: 0 Strand: + Mutations: 187
0

LTR54 212628817-212629026 | TFBS: 0 | Strand: +

LTR54 212628817-212629026 BLAT view
TFBS: 0 Strand: + Mutations: 216
0

LTR54 214401727-214402020 | TFBS: 0 | Strand: -

LTR54 214401727-214402020 BLAT view
TFBS: 0 Strand: - Mutations: 145
0

LTR54 218746731-218747067 | TFBS: 0 | Strand: +

LTR54 218746731-218747067 BLAT view
TFBS: 0 Strand: + Mutations: 152
0

LTR54 218747090-218747256 | TFBS: 0 | Strand: +

LTR54 218747090-218747256 BLAT view
TFBS: 0 Strand: + Mutations: 152
0

LTR54 219211888-219212323 | TFBS: 0 | Strand: +

LTR54 219211888-219212323 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR54 219219264-219219636 | TFBS: 0 | Strand: +

LTR54 219219264-219219636 BLAT view
TFBS: 0 Strand: + Mutations: 141
0

LTR54 220266842-220267022 | TFBS: 2 | Strand: +

LTR54 220266842-220267022 BLAT view
TFBS: 2 Strand: + Mutations: 212
HEY1/220266726/220266956/150
YY1/220266793/220266875/170

LTR54 220599255-220599767 | TFBS: 2 | Strand: +

LTR54 220599255-220599767 BLAT view
TFBS: 2 Strand: + Mutations: 144
STAT3/220599227/220599517/320
CEBPB/220599260/220599504/135

LTR54 222135501-222136017 | TFBS: 1 | Strand: -

LTR54 222135501-222136017 BLAT view
TFBS: 1 Strand: - Mutations: 184
eGFP-JunD/222135772/222136068/480

LTR54 225070452-225070499 | TFBS: 0 | Strand: -

LTR54 225070452-225070499 BLAT view
TFBS: 0 Strand: - Mutations: 204
0

LTR54 225070796-225071160 | TFBS: 0 | Strand: -

LTR54 225070796-225071160 BLAT view
TFBS: 0 Strand: - Mutations: 204
0

LTR54 226645667-226646157 | TFBS: 0 | Strand: -

LTR54 226645667-226646157 BLAT view
TFBS: 0 Strand: - Mutations: 181
0

LTR54 228326121-228326220 | TFBS: 1 | Strand: +

LTR54 228326121-228326220 BLAT view
TFBS: 1 Strand: + Mutations: 194
PU.1/228326129/228326359/347

LTR54 230588727-230589153 | TFBS: 0 | Strand: -

LTR54 230588727-230589153 BLAT view
TFBS: 0 Strand: - Mutations: 106
0

LTR54 232934020-232934475 | TFBS: 0 | Strand: -

LTR54 232934020-232934475 BLAT view
TFBS: 0 Strand: - Mutations: 185
0

LTR54 235121596-235121680 | TFBS: 0 | Strand: +

LTR54 235121596-235121680 BLAT view
TFBS: 0 Strand: + Mutations: 183
0

LTR54 235122293-235122750 | TFBS: 10 | Strand: +

LTR54 235122293-235122750 BLAT view
TFBS: 10 Strand: + Mutations: 183
Egr-1/235122213/235122429/527
NANOG_(SC-33759)/235122514/235122724/239
GATA-2/235122661/235123041/276
NFKB/235122678/235123010/546
SP1/235122682/235122962/314
PU.1/235122696/235122909/905
c-Jun/235122697/235122973/275
ELF1_(SC-631)/235122699/235122949/359
RXRA/235122700/235122960/251
TR4/235122713/235123017/100

LTR54 236025265-236025584 | TFBS: 0 | Strand: +

LTR54 236025265-236025584 BLAT view
TFBS: 0 Strand: + Mutations: 159
0

LTR54 236026171-236026308 | TFBS: 0 | Strand: +

LTR54 236026171-236026308 BLAT view
TFBS: 0 Strand: + Mutations: 153
0

LTR54 236513872-236513996 | TFBS: 0 | Strand: -

LTR54 236513872-236513996 BLAT view
TFBS: 0 Strand: - Mutations: 119
0

LTR54 236514597-236514628 | TFBS: 0 | Strand: -

LTR54 236514597-236514628 BLAT view
TFBS: 0 Strand: - Mutations: 131
0

LTR54 236515519-236515722 | TFBS: 5 | Strand: -

LTR54 236515519-236515722 BLAT view
TFBS: 5 Strand: - Mutations: 131
p300_(F-4)/236515249/236515525/517
Pol2-4H8/236515288/236515532/468
eGFP-GATA2/236515296/236515680/461
GATA2_(CG2-96)/236515299/236515529/525
E2F6_(H-50)/236515674/236515874/110

LTR54 236520712-236520757 | TFBS: 1 | Strand: +

LTR54 236520712-236520757 BLAT view
TFBS: 1 Strand: + Mutations: 132
KAP1/236520560/236521010/668

LTR54 236521143-236521164 | TFBS: 0 | Strand: +

LTR54 236521143-236521164 BLAT view
TFBS: 0 Strand: + Mutations: 132
0

LTR54 236521470-236521680 | TFBS: 0 | Strand: +

LTR54 236521470-236521680 BLAT view
TFBS: 0 Strand: + Mutations: 132
0

LTR54 238365409-238365662 | TFBS: 0 | Strand: +

LTR54 238365409-238365662 BLAT view
TFBS: 0 Strand: + Mutations: 137
0

LTR54 238365947-238366160 | TFBS: 0 | Strand: +

LTR54 238365947-238366160 BLAT view
TFBS: 0 Strand: + Mutations: 137
0

LTR54 244472385-244472511 | TFBS: 0 | Strand: -

LTR54 244472385-244472511 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR54 244472876-244473197 | TFBS: 0 | Strand: -

LTR54 244472876-244473197 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR54 246241522-246241819 | TFBS: 2 | Strand: +

LTR54 246241522-246241819 BLAT view
TFBS: 2 Strand: + Mutations: 177
eGFP-GATA2/246241677/246242061/499
PU.1/246241729/246241819/421

LTR54 249083457-249083512 | TFBS: 0 | Strand: -

LTR54 249083457-249083512 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR54 249083799-249083896 | TFBS: 0 | Strand: -

LTR54 249083799-249083896 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR54 249084985-249085286 | TFBS: 3 | Strand: -

LTR54 249084985-249085286 BLAT view
TFBS: 3 Strand: - Mutations: 134
Rad21/249085265/249085505/399
CTCF/249085272/249085476/250
HNF4A_(H-171)/249085277/249085517/265

TFBS+