HERV genome browser

31156328

249250622

Insertions

LTR49 16844606-16844754 | TFBS: 0 | Strand: +

LTR49 16844606-16844754 BLAT view
TFBS: 0 Strand: + Mutations: 122
0

LTR49 16850307-16850898 | TFBS: 0 | Strand: +

LTR49 16850307-16850898 BLAT view
TFBS: 0 Strand: + Mutations: 149
0

LTR49 17212466-17213057 | TFBS: 0 | Strand: -

LTR49 17212466-17213057 BLAT view
TFBS: 0 Strand: - Mutations: 151
0

LTR49 17218577-17218726 | TFBS: 0 | Strand: -

LTR49 17218577-17218726 BLAT view
TFBS: 0 Strand: - Mutations: 148
0

LTR49 34885865-34886387 | TFBS: 0 | Strand: -

LTR49 34885865-34886387 BLAT view
TFBS: 0 Strand: - Mutations: 109
0

LTR49 43085022-43085593 | TFBS: 0 | Strand: -

LTR49 43085022-43085593 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR49 43441622-43441834 | TFBS: 0 | Strand: -

LTR49 43441622-43441834 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR49 43442133-43442514 | TFBS: 0 | Strand: -

LTR49 43442133-43442514 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR49 45787089-45787133 | TFBS: 4 | Strand: -

LTR49 45787089-45787133 BLAT view
TFBS: 4 Strand: - Mutations: 167
YY1/45786945/45787189/135
YY1_(C-20)/45786957/45787231/129
FOXA1_(SC-101058)/45786992/45787262/131
FOXA1_(C-20)/45787018/45787278/117

LTR49 49734994-49735571 | TFBS: 0 | Strand: +

LTR49 49734994-49735571 BLAT view
TFBS: 0 Strand: + Mutations: 152
0

LTR49 49742075-49742640 | TFBS: 0 | Strand: +

LTR49 49742075-49742640 BLAT view
TFBS: 0 Strand: + Mutations: 142
0

LTR49 51654216-51654266 | TFBS: 1 | Strand: +

LTR49 51654216-51654266 BLAT view
TFBS: 1 Strand: + Mutations: 83
MafK_(ab50322)/51653958/51654222/1000

LTR49 52100120-52100378 | TFBS: 1 | Strand: -

LTR49 52100120-52100378 BLAT view
TFBS: 1 Strand: - Mutations: 184
PAX5-C20/52100366/52100590/356

LTR49 52100738-52100847 | TFBS: 0 | Strand: -

LTR49 52100738-52100847 BLAT view
TFBS: 0 Strand: - Mutations: 184
0

LTR49 52100977-52101231 | TFBS: 0 | Strand: -

LTR49 52100977-52101231 BLAT view
TFBS: 0 Strand: - Mutations: 184
0

LTR49 53896408-53896719 | TFBS: 5 | Strand: +

LTR49 53896408-53896719 BLAT view
TFBS: 5 Strand: + Mutations: 101
SP1/53896524/53896788/351
TCF12/53896548/53896764/318
YY1_(C-20)/53896563/53896827/120
HDAC2_(SC-6296)/53896590/53896780/594
POU5F1_(SC-9081)/53896605/53896805/427

LTR49 53896769-53896992 | TFBS: 4 | Strand: +

LTR49 53896769-53896992 BLAT view
TFBS: 4 Strand: + Mutations: 101
SP1/53896524/53896788/351
YY1_(C-20)/53896563/53896827/120
HDAC2_(SC-6296)/53896590/53896780/594
POU5F1_(SC-9081)/53896605/53896805/427

LTR49 65909387-65909639 | TFBS: 0 | Strand: +

LTR49 65909387-65909639 BLAT view
TFBS: 0 Strand: + Mutations: 208
0

LTR49 65909892-65910263 | TFBS: 0 | Strand: +

LTR49 65909892-65910263 BLAT view
TFBS: 0 Strand: + Mutations: 207
0

LTR49 67476455-67476961 | TFBS: 0 | Strand: +

LTR49 67476455-67476961 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR49 68505277-68505353 | TFBS: 0 | Strand: +

LTR49 68505277-68505353 BLAT view
TFBS: 0 Strand: + Mutations: 212
0

LTR49 68505713-68505839 | TFBS: 0 | Strand: +

LTR49 68505713-68505839 BLAT view
TFBS: 0 Strand: + Mutations: 190
0

LTR49 68933629-68934184 | TFBS: 0 | Strand: -

LTR49 68933629-68934184 BLAT view
TFBS: 0 Strand: - Mutations: 123
0

LTR49 80564909-80565040 | TFBS: 0 | Strand: +

LTR49 80564909-80565040 BLAT view
TFBS: 0 Strand: + Mutations: 202
0

LTR49 80623452-80624027 | TFBS: 0 | Strand: +

LTR49 80623452-80624027 BLAT view
TFBS: 0 Strand: + Mutations: 195
0

LTR49 80647093-80647628 | TFBS: 0 | Strand: -

LTR49 80647093-80647628 BLAT view
TFBS: 0 Strand: - Mutations: 188
0

LTR49 86927545-86927704 | TFBS: 10 | Strand: -

LTR49 86927545-86927704 BLAT view
TFBS: 10 Strand: - Mutations: 171
SETDB1/86927137/86927655/660
Pol2(b)/86927209/86927565/308
KAP1/86927219/86927669/318
CCNT2/86927280/86927596/314
GATA-1/86927292/86927710/734
TAL1_(SC-12984)/86927299/86927559/1000
GABP/86927310/86927580/45
Pol2-4H8/86927336/86927580/549
p300_(F-4)/86927365/86927641/305
NRSF/86927406/86927590/29

LTR49 89996784-89997384 | TFBS: 0 | Strand: -

LTR49 89996784-89997384 BLAT view
TFBS: 0 Strand: - Mutations: 127
0

LTR49 91671685-91671824 | TFBS: 0 | Strand: +

LTR49 91671685-91671824 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR49 96360734-96360983 | TFBS: 0 | Strand: -

LTR49 96360734-96360983 BLAT view
TFBS: 0 Strand: - Mutations: 140
0

LTR49 100432513-100432584 | TFBS: 0 | Strand: -

LTR49 100432513-100432584 BLAT view
TFBS: 0 Strand: - Mutations: 109
0

LTR49 100432909-100433313 | TFBS: 0 | Strand: -

LTR49 100432909-100433313 BLAT view
TFBS: 0 Strand: - Mutations: 109
0

LTR49 100433626-100433721 | TFBS: 0 | Strand: -

LTR49 100433626-100433721 BLAT view
TFBS: 0 Strand: - Mutations: 109
0

LTR49 102037923-102038483 | TFBS: 0 | Strand: -

LTR49 102037923-102038483 BLAT view
TFBS: 0 Strand: - Mutations: 125
0

LTR49 105473194-105473321 | TFBS: 0 | Strand: -

LTR49 105473194-105473321 BLAT view
TFBS: 0 Strand: - Mutations: 206
0

LTR49 114905367-114905441 | TFBS: 0 | Strand: +

LTR49 114905367-114905441 BLAT view
TFBS: 0 Strand: + Mutations: 236
0

LTR49 116078698-116079158 | TFBS: 0 | Strand: -

LTR49 116078698-116079158 BLAT view
TFBS: 0 Strand: - Mutations: 178
0

LTR49 116079840-116079890 | TFBS: 0 | Strand: -

LTR49 116079840-116079890 BLAT view
TFBS: 0 Strand: - Mutations: 138
0

LTR49 142665282-142665326 | TFBS: 0 | Strand: -

LTR49 142665282-142665326 BLAT view
TFBS: 0 Strand: - Mutations: 119
0

LTR49 143161744-143161788 | TFBS: 0 | Strand: -

LTR49 143161744-143161788 BLAT view
TFBS: 0 Strand: - Mutations: 95
0

LTR49 143426172-143426216 | TFBS: 0 | Strand: +

LTR49 143426172-143426216 BLAT view
TFBS: 0 Strand: + Mutations: 95
0

LTR49 143676778-143676940 | TFBS: 0 | Strand: +

LTR49 143676778-143676940 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR49 143681691-143681792 | TFBS: 0 | Strand: +

LTR49 143681691-143681792 BLAT view
TFBS: 0 Strand: + Mutations: 164
0

LTR49 143682399-143682583 | TFBS: 0 | Strand: +

LTR49 143682399-143682583 BLAT view
TFBS: 0 Strand: + Mutations: 239
0

LTR49 143683219-143683404 | TFBS: 0 | Strand: +

LTR49 143683219-143683404 BLAT view
TFBS: 0 Strand: + Mutations: 189
0

LTR49 143683708-143683733 | TFBS: 0 | Strand: +

LTR49 143683708-143683733 BLAT view
TFBS: 0 Strand: + Mutations: 177
0

LTR49 144295847-144295898 | TFBS: 0 | Strand: +

LTR49 144295847-144295898 BLAT view
TFBS: 0 Strand: + Mutations: 196
0

LTR49 144298082-144298524 | TFBS: 0 | Strand: -

LTR49 144298082-144298524 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR49 144315000-144315025 | TFBS: 0 | Strand: -

LTR49 144315000-144315025 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

LTR49 144315328-144315513 | TFBS: 0 | Strand: -

LTR49 144315328-144315513 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

LTR49 144316121-144316304 | TFBS: 0 | Strand: -

LTR49 144316121-144316304 BLAT view
TFBS: 0 Strand: - Mutations: 216
0

LTR49 144316933-144317012 | TFBS: 0 | Strand: -

LTR49 144316933-144317012 BLAT view
TFBS: 0 Strand: - Mutations: 153
0

LTR49 144476078-144476129 | TFBS: 0 | Strand: +

LTR49 144476078-144476129 BLAT view
TFBS: 0 Strand: + Mutations: 196
0

LTR49 144478311-144478753 | TFBS: 0 | Strand: -

LTR49 144478311-144478753 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR49 144495242-144495267 | TFBS: 0 | Strand: -

LTR49 144495242-144495267 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

LTR49 144495571-144495756 | TFBS: 0 | Strand: -

LTR49 144495571-144495756 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

LTR49 144496364-144496547 | TFBS: 0 | Strand: -

LTR49 144496364-144496547 BLAT view
TFBS: 0 Strand: - Mutations: 216
0

LTR49 144497176-144497255 | TFBS: 0 | Strand: -

LTR49 144497176-144497255 BLAT view
TFBS: 0 Strand: - Mutations: 153
0

LTR49 146873446-146873981 | TFBS: 0 | Strand: -

LTR49 146873446-146873981 BLAT view
TFBS: 0 Strand: - Mutations: 149
0

LTR49 147864291-147864453 | TFBS: 0 | Strand: +

LTR49 147864291-147864453 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR49 147869204-147869305 | TFBS: 0 | Strand: +

LTR49 147869204-147869305 BLAT view
TFBS: 0 Strand: + Mutations: 164
0

LTR49 147869912-147870096 | TFBS: 0 | Strand: +

LTR49 147869912-147870096 BLAT view
TFBS: 0 Strand: + Mutations: 239
0

LTR49 147870728-147870913 | TFBS: 0 | Strand: +

LTR49 147870728-147870913 BLAT view
TFBS: 0 Strand: + Mutations: 189
0

LTR49 147871217-147871242 | TFBS: 0 | Strand: +

LTR49 147871217-147871242 BLAT view
TFBS: 0 Strand: + Mutations: 177
0

LTR49 148663237-148663778 | TFBS: 0 | Strand: +

LTR49 148663237-148663778 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

LTR49 148665707-148665742 | TFBS: 0 | Strand: +

LTR49 148665707-148665742 BLAT view
TFBS: 0 Strand: + Mutations: 184
0

LTR49 148666018-148666400 | TFBS: 0 | Strand: +

LTR49 148666018-148666400 BLAT view
TFBS: 0 Strand: + Mutations: 184
0

LTR49 148825149-148825690 | TFBS: 0 | Strand: +

LTR49 148825149-148825690 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

LTR49 148827619-148827654 | TFBS: 0 | Strand: +

LTR49 148827619-148827654 BLAT view
TFBS: 0 Strand: + Mutations: 184
0

LTR49 148827930-148828312 | TFBS: 0 | Strand: +

LTR49 148827930-148828312 BLAT view
TFBS: 0 Strand: + Mutations: 184
0

LTR49 149019240-149019622 | TFBS: 0 | Strand: -

LTR49 149019240-149019622 BLAT view
TFBS: 0 Strand: - Mutations: 184
0

LTR49 149019898-149019933 | TFBS: 0 | Strand: -

LTR49 149019898-149019933 BLAT view
TFBS: 0 Strand: - Mutations: 184
0

LTR49 149021861-149022404 | TFBS: 0 | Strand: -

LTR49 149021861-149022404 BLAT view
TFBS: 0 Strand: - Mutations: 194
0

LTR49 149227764-149227928 | TFBS: 0 | Strand: +

LTR49 149227764-149227928 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR49 149233801-149234392 | TFBS: 0 | Strand: +

LTR49 149233801-149234392 BLAT view
TFBS: 0 Strand: + Mutations: 139
0

LTR49 149238524-149238575 | TFBS: 0 | Strand: -

LTR49 149238524-149238575 BLAT view
TFBS: 0 Strand: - Mutations: 196
0

LTR49 149600273-149600352 | TFBS: 0 | Strand: +

LTR49 149600273-149600352 BLAT view
TFBS: 0 Strand: + Mutations: 146
0

LTR49 149600981-149601164 | TFBS: 0 | Strand: +

LTR49 149600981-149601164 BLAT view
TFBS: 0 Strand: + Mutations: 216
0

LTR49 149601768-149601953 | TFBS: 0 | Strand: +

LTR49 149601768-149601953 BLAT view
TFBS: 0 Strand: + Mutations: 180
0

LTR49 149602255-149602280 | TFBS: 0 | Strand: +

LTR49 149602255-149602280 BLAT view
TFBS: 0 Strand: + Mutations: 171
0

LTR49 149618773-149619215 | TFBS: 0 | Strand: +

LTR49 149618773-149619215 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR49 149621399-149621450 | TFBS: 0 | Strand: -

LTR49 149621399-149621450 BLAT view
TFBS: 0 Strand: - Mutations: 196
0

LTR49 153695372-153695450 | TFBS: 0 | Strand: -

LTR49 153695372-153695450 BLAT view
TFBS: 0 Strand: - Mutations: 156
0

LTR49 157296632-157296674 | TFBS: 0 | Strand: +

LTR49 157296632-157296674 BLAT view
TFBS: 0 Strand: + Mutations: 150
0

LTR49 160568705-160568974 | TFBS: 0 | Strand: -

LTR49 160568705-160568974 BLAT view
TFBS: 0 Strand: - Mutations: 154
0

LTR49 164878411-164878855 | TFBS: 0 | Strand: -

LTR49 164878411-164878855 BLAT view
TFBS: 0 Strand: - Mutations: 179
0

LTR49 166497162-166497212 | TFBS: 0 | Strand: +

LTR49 166497162-166497212 BLAT view
TFBS: 0 Strand: + Mutations: 167
0

LTR49 171129391-171129766 | TFBS: 0 | Strand: -

LTR49 171129391-171129766 BLAT view
TFBS: 0 Strand: - Mutations: 195
0

LTR49 175890636-175891017 | TFBS: 0 | Strand: +

LTR49 175890636-175891017 BLAT view
TFBS: 0 Strand: + Mutations: 112
0

LTR49 175891730-175891961 | TFBS: 4 | Strand: +

LTR49 175891730-175891961 BLAT view
TFBS: 4 Strand: + Mutations: 123
Pol2/175891467/175891771/170
SP1/175891502/175891766/405
SIX5/175891567/175891791/130
SRF/175891595/175891805/81

LTR49 175901952-175902161 | TFBS: 0 | Strand: +

LTR49 175901952-175902161 BLAT view
TFBS: 0 Strand: + Mutations: 100
0

LTR49 175902458-175902614 | TFBS: 0 | Strand: +

LTR49 175902458-175902614 BLAT view
TFBS: 0 Strand: + Mutations: 100
0

LTR49 178781128-178781768 | TFBS: 0 | Strand: -

LTR49 178781128-178781768 BLAT view
TFBS: 0 Strand: - Mutations: 190
0

LTR49 179498477-179499023 | TFBS: 3 | Strand: -

LTR49 179498477-179499023 BLAT view
TFBS: 3 Strand: - Mutations: 193
YY1_(C-20)/179498692/179498956/136
POU5F1_(SC-9081)/179498722/179498922/579
NANOG_(SC-33759)/179498805/179498955/1000

LTR49 185346391-185346446 | TFBS: 0 | Strand: +

LTR49 185346391-185346446 BLAT view
TFBS: 0 Strand: + Mutations: 148
0

LTR49 185619061-185619677 | TFBS: 0 | Strand: -

LTR49 185619061-185619677 BLAT view
TFBS: 0 Strand: - Mutations: 148
0

LTR49 188065620-188066171 | TFBS: 0 | Strand: +

LTR49 188065620-188066171 BLAT view
TFBS: 0 Strand: + Mutations: 240
0

LTR49 191671687-191672247 | TFBS: 0 | Strand: +

LTR49 191671687-191672247 BLAT view
TFBS: 0 Strand: + Mutations: 174
0

LTR49 193899268-193899811 | TFBS: 0 | Strand: +

LTR49 193899268-193899811 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

LTR49 193906232-193906853 | TFBS: 0 | Strand: +

LTR49 193906232-193906853 BLAT view
TFBS: 0 Strand: + Mutations: 216
0

LTR49 201487742-201487905 | TFBS: 0 | Strand: -

LTR49 201487742-201487905 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR49 201488208-201488616 | TFBS: 0 | Strand: -

LTR49 201488208-201488616 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR49 206742403-206742957 | TFBS: 3 | Strand: -

LTR49 206742403-206742957 BLAT view
TFBS: 3 Strand: - Mutations: 122
MafF_(M8194)/206742345/206742615/225
MafK_(ab50322)/206742367/206742607/418
MafK_(SC-477)/206742368/206742612/454

LTR49 209332014-209332625 | TFBS: 0 | Strand: +

LTR49 209332014-209332625 BLAT view
TFBS: 0 Strand: + Mutations: 151
0

LTR49 213380478-213381012 | TFBS: 0 | Strand: +

LTR49 213380478-213381012 BLAT view
TFBS: 0 Strand: + Mutations: 224
0

LTR49 213381315-213381410 | TFBS: 0 | Strand: +

LTR49 213381315-213381410 BLAT view
TFBS: 0 Strand: + Mutations: 224
0

LTR49 218188610-218188655 | TFBS: 0 | Strand: +

LTR49 218188610-218188655 BLAT view
TFBS: 0 Strand: + Mutations: 116
0

LTR49 222415979-222416306 | TFBS: 0 | Strand: +

LTR49 222415979-222416306 BLAT view
TFBS: 0 Strand: + Mutations: 192
0

LTR49 226035475-226035539 | TFBS: 0 | Strand: +

LTR49 226035475-226035539 BLAT view
TFBS: 0 Strand: + Mutations: 94
0

LTR49 226632621-226633140 | TFBS: 11 | Strand: -

LTR49 226632621-226633140 BLAT view
TFBS: 11 Strand: - Mutations: 148
CTCF/226632617/226632937/623
CTCF_(SC-5916)/226632669/226632873/101
CTCF_(C-20)/226632695/226632895/148
PAX5-N19/226632695/226632955/295
EBF1_(C-8)/226632700/226632936/172
POU2F2/226632707/226632947/230
Oct-2/226632707/226632947/230
YY1_(C-20)/226632708/226633028/110
SP1/226632727/226632987/121
TCF12/226632763/226632979/308
PU.1/226632766/226632936/436

LTR49 227036225-227036271 | TFBS: 0 | Strand: +

LTR49 227036225-227036271 BLAT view
TFBS: 0 Strand: + Mutations: 159
0

LTR49 229198889-229199470 | TFBS: 1 | Strand: -

LTR49 229198889-229199470 BLAT view
TFBS: 1 Strand: - Mutations: 136
CTCF/229198735/229198985/145

LTR49 232715451-232715639 | TFBS: 0 | Strand: -

LTR49 232715451-232715639 BLAT view
TFBS: 0 Strand: - Mutations: 143
0

LTR49 232716262-232716643 | TFBS: 1 | Strand: -

LTR49 232716262-232716643 BLAT view
TFBS: 1 Strand: - Mutations: 143
STAT3/232716172/232716454/1000

LTR49 233612260-233612344 | TFBS: 0 | Strand: +

LTR49 233612260-233612344 BLAT view
TFBS: 0 Strand: + Mutations: 152
0

LTR49 233613020-233613453 | TFBS: 4 | Strand: +

LTR49 233613020-233613453 BLAT view
TFBS: 4 Strand: + Mutations: 152
CTCF/233613196/233613482/268
Rad21/233613198/233613434/416
SMC3_(ab9263)/233613206/233613442/244
CTCF_(C-20)/233613208/233613408/146

LTR49 234915312-234915538 | TFBS: 0 | Strand: +

LTR49 234915312-234915538 BLAT view
TFBS: 0 Strand: + Mutations: 191
0

LTR49 234915828-234916202 | TFBS: 1 | Strand: +

LTR49 234915828-234916202 BLAT view
TFBS: 1 Strand: + Mutations: 191
POU5F1_(SC-9081)/234915998/234916198/446

LTR49 237179940-237180522 | TFBS: 0 | Strand: +

LTR49 237179940-237180522 BLAT view
TFBS: 0 Strand: + Mutations: 127
0

LTR49 238123751-238124305 | TFBS: 0 | Strand: +

LTR49 238123751-238124305 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR49 238338285-238338418 | TFBS: 0 | Strand: +

LTR49 238338285-238338418 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

LTR49 238338850-238339275 | TFBS: 0 | Strand: +

LTR49 238338850-238339275 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

LTR49 240223545-240223627 | TFBS: 0 | Strand: -

LTR49 240223545-240223627 BLAT view
TFBS: 0 Strand: - Mutations: 183
0

LTR49 241175890-241176353 | TFBS: 1 | Strand: +

LTR49 241175890-241176353 BLAT view
TFBS: 1 Strand: + Mutations: 174
YY1_(C-20)/241176137/241176401/108

LTR49 241176662-241176833 | TFBS: 0 | Strand: +

LTR49 241176662-241176833 BLAT view
TFBS: 0 Strand: + Mutations: 206
0

LTR49 241326620-241327080 | TFBS: 1 | Strand: +

LTR49 241326620-241327080 BLAT view
TFBS: 1 Strand: + Mutations: 122
NANOG_(SC-33759)/241326794/241326897/647

LTR49 242484346-242484595 | TFBS: 0 | Strand: +

LTR49 242484346-242484595 BLAT view
TFBS: 0 Strand: + Mutations: 169
0

LTR49 242484906-242485196 | TFBS: 0 | Strand: +

LTR49 242484906-242485196 BLAT view
TFBS: 0 Strand: + Mutations: 169
0

LTR49 248071539-248072088 | TFBS: 0 | Strand: -

LTR49 248071539-248072088 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

TFBS+