HERV genome browser

31156328

249250622

Insertions

LTR36 6753878-6753894 | TFBS: 0 | Strand: +

LTR36 6753878-6753894 BLAT view
TFBS: 0 Strand: + Mutations: 161
0

LTR36 6754196-6754364 | TFBS: 1 | Strand: +

LTR36 6754196-6754364 BLAT view
TFBS: 1 Strand: + Mutations: 161
SP1/6754144/6754408/200

LTR36 6754398-6754671 | TFBS: 1 | Strand: +

LTR36 6754398-6754671 BLAT view
TFBS: 1 Strand: + Mutations: 236
SP1/6754144/6754408/200

LTR36 7972925-7973535 | TFBS: 3 | Strand: +

LTR36 7972925-7973535 BLAT view
TFBS: 3 Strand: + Mutations: 179
Pol2/7973145/7973432/455
PU.1/7973282/7973424/452
HDAC2_(SC-6296)/7973435/7973639/414

LTR36 14425794-14426408 | TFBS: 0 | Strand: +

LTR36 14425794-14426408 BLAT view
TFBS: 0 Strand: + Mutations: 164
0

LTR36 15452271-15452802 | TFBS: 0 | Strand: +

LTR36 15452271-15452802 BLAT view
TFBS: 0 Strand: + Mutations: 154
0

LTR36 30535288-30535808 | TFBS: 0 | Strand: +

LTR36 30535288-30535808 BLAT view
TFBS: 0 Strand: + Mutations: 233
0

LTR36 33505299-33505833 | TFBS: 3 | Strand: +

LTR36 33505299-33505833 BLAT view
TFBS: 3 Strand: + Mutations: 234
Max/33505470/33505706/181
Pol2/33505564/33505844/172
PU.1/33505568/33505806/187

LTR36 49327540-49328009 | TFBS: 0 | Strand: +

LTR36 49327540-49328009 BLAT view
TFBS: 0 Strand: + Mutations: 190
0

LTR36 49328290-49328378 | TFBS: 0 | Strand: +

LTR36 49328290-49328378 BLAT view
TFBS: 0 Strand: + Mutations: 190
0

LTR36 62440291-62440392 | TFBS: 3 | Strand: +

LTR36 62440291-62440392 BLAT view
TFBS: 3 Strand: + Mutations: 89
MafK_(ab50322)/62440090/62440330/288
MafF_(M8194)/62440093/62440363/195
MafK_(SC-477)/62440105/62440349/249

LTR36 62440389-62440454 | TFBS: 0 | Strand: -

LTR36 62440389-62440454 BLAT view
TFBS: 0 Strand: - Mutations: 89
0

LTR36 62505318-62505777 | TFBS: 0 | Strand: -

LTR36 62505318-62505777 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR36 62506068-62506177 | TFBS: 0 | Strand: -

LTR36 62506068-62506177 BLAT view
TFBS: 0 Strand: - Mutations: 141
0

LTR36 65743209-65743768 | TFBS: 12 | Strand: -

LTR36 65743209-65743768 BLAT view
TFBS: 12 Strand: - Mutations: 150
Pol2/65743184/65743929/498
GATA-1/65743225/65743849/1000
CEBPB/65743368/65743624/232
CCNT2/65743379/65743695/244
GATA-2/65743400/65743670/480
GATA2_(CG2-96)/65743411/65743641/522
HDAC2_(SC-6296)/65743412/65743616/509
Brg1/65743430/65743975/611
USF-1/65743432/65743682/81
Pol2-4H8/65743438/65743682/540
TAL1_(SC-12984)/65743453/65743651/486
NRSF/65743461/65743645/44

LTR36 68454965-68455035 | TFBS: 0 | Strand: +

LTR36 68454965-68455035 BLAT view
TFBS: 0 Strand: + Mutations: 157
0

LTR36 101947830-101948360 | TFBS: 0 | Strand: +

LTR36 101947830-101948360 BLAT view
TFBS: 0 Strand: + Mutations: 184
0

LTR36 108364417-108364994 | TFBS: 0 | Strand: -

LTR36 108364417-108364994 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

LTR36 108365330-108365363 | TFBS: 0 | Strand: -

LTR36 108365330-108365363 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

LTR36 109022459-109023002 | TFBS: 0 | Strand: -

LTR36 109022459-109023002 BLAT view
TFBS: 0 Strand: - Mutations: 249
0

LTR36 109023025-109023074 | TFBS: 0 | Strand: -

LTR36 109023025-109023074 BLAT view
TFBS: 0 Strand: - Mutations: 249
0

LTR36 113760380-113760960 | TFBS: 13 | Strand: +

LTR36 113760380-113760960 BLAT view
TFBS: 13 Strand: + Mutations: 201
Pol2/113760079/113760489/629
TCF4/113760087/113760471/92
GATA-1/113760354/113760804/187
FOXA1_(SC-101058)/113760414/113760684/238
FOXA2_(SC-6554)/113760426/113760650/241
eGFP-GATA2/113760431/113760815/547
SRF/113760446/113760610/156
GATA-2/113760467/113760749/995
p300/113760468/113760738/294
FOXA1_(C-20)/113760481/113760559/246
SIRT6/113760506/113760762/406
USF-1/113760630/113760880/462
USF1_(SC-8983)/113760693/113760797/121

LTR36 114049242-114049833 | TFBS: 0 | Strand: -

LTR36 114049242-114049833 BLAT view
TFBS: 0 Strand: - Mutations: 134
0

LTR36 114921836-114921964 | TFBS: 0 | Strand: +

LTR36 114921836-114921964 BLAT view
TFBS: 0 Strand: + Mutations: 183
0

LTR36 114922605-114923043 | TFBS: 31 | Strand: +

LTR36 114922605-114923043 BLAT view
TFBS: 31 Strand: + Mutations: 180
Pol2/114922544/114922954/1000
BCLAF1_(M33-P5B11)/114922554/114922778/259
GATA-1/114922569/114923126/1000
CCNT2/114922618/114922974/1000
TAL1_(SC-12984)/114922630/114922987/1000
STAT1/114922646/114922980/238
c-Jun/114922658/114923035/510
TBP/114922659/114922929/34
STAT2/114922661/114922948/310
USF-1/114922661/114922911/97
p300_(F-4)/114922663/114922939/1000
HDAC2_(SC-6296)/114922663/114922888/1000
eGFP-JunB/114922665/114922955/578
GABP/114922669/114922939/124
Egr-1/114922671/114922828/1000
eGFP-JunD/114922672/114922968/414
Brg1/114922673/114923017/1000
Ini1/114922680/114923044/722
GATA-2/114922692/114922958/1000
BCL3/114922699/114922889/571
GATA2_(CG2-96)/114922700/114922931/1000
eGFP-GATA2/114922701/114922979/1000
NRSF/114922707/114922891/91
SIRT6/114922711/114922967/1000
Mxi1_(bHLH)/114922717/114922973/375
Pol2(b)/114922718/114922927/1000
Pol2-4H8/114922726/114922883/1000
IRF1/114922750/114923034/157
HMGN3/114922754/114922831/1000
PU.1/114922795/114922989/1000
ELF1_(SC-631)/114922806/114922953/316

LTR36 115544861-115544920 | TFBS: 0 | Strand: -

LTR36 115544861-115544920 BLAT view
TFBS: 0 Strand: - Mutations: 203
0

LTR36 115544935-115545379 | TFBS: 0 | Strand: -

LTR36 115544935-115545379 BLAT view
TFBS: 0 Strand: - Mutations: 196
0

LTR36 117255047-117255648 | TFBS: 0 | Strand: -

LTR36 117255047-117255648 BLAT view
TFBS: 0 Strand: - Mutations: 197
0

LTR36 119883498-119883964 | TFBS: 3 | Strand: +

LTR36 119883498-119883964 BLAT view
TFBS: 3 Strand: + Mutations: 134
SRF/119883531/119883656/358
HDAC2_(SC-6296)/119883581/119883771/528
Pol2/119883946/119884210/114

LTR36 146566677-146566938 | TFBS: 0 | Strand: +

LTR36 146566677-146566938 BLAT view
TFBS: 0 Strand: + Mutations: 201
0

LTR36 151713861-151714463 | TFBS: 0 | Strand: +

LTR36 151713861-151714463 BLAT view
TFBS: 0 Strand: + Mutations: 123
0

LTR36 153457424-153457583 | TFBS: 0 | Strand: -

LTR36 153457424-153457583 BLAT view
TFBS: 0 Strand: - Mutations: 172
0

LTR36 157742500-157742652 | TFBS: 0 | Strand: +

LTR36 157742500-157742652 BLAT view
TFBS: 0 Strand: + Mutations: 199
0

LTR36 157742678-157743007 | TFBS: 0 | Strand: +

LTR36 157742678-157743007 BLAT view
TFBS: 0 Strand: + Mutations: 173
0

LTR36 160696235-160696780 | TFBS: 24 | Strand: +

LTR36 160696235-160696780 BLAT view
TFBS: 24 Strand: + Mutations: 200
GTF2F1_(RAP-74)/160695974/160696250/276
MafK_(ab50322)/160696008/160696248/774
TBP/160696008/160696318/285
CTCF/160696634/160696948/1000
NFKB/160696643/160697099/317
IRF4_(M-17)/160696647/160696917/410
MEF2A/160696660/160696916/346
EBF/160696665/160697035/1000
EBF1_(C-8)/160696668/160697069/1000
YY1_(C-20)/160696669/160696919/370
SP1/160696676/160696936/216
SMC3_(ab9263)/160696677/160696939/1000
POU2F2/160696677/160696901/273
Oct-2/160696677/160696901/274
MEF2C_(SC-13268)/160696677/160696921/253
CTCF_(SC-5916)/160696682/160696898/739
Rad21/160696684/160696921/1000
PAX5-C20/160696685/160696909/216
CTCF_(C-20)/160696687/160696883/1000
YY1/160696697/160697244/234
Znf143_(16618-1-AP)/160696700/160696904/90
BCL11A/160696708/160696944/545
TCF12/160696740/160696924/1000
RXRA/160696774/160696944/762

LTR36 184449736-184450348 | TFBS: 0 | Strand: -

LTR36 184449736-184450348 BLAT view
TFBS: 0 Strand: - Mutations: 142
0

LTR36 188542454-188543024 | TFBS: 0 | Strand: +

LTR36 188542454-188543024 BLAT view
TFBS: 0 Strand: + Mutations: 168
0

LTR36 188547863-188548047 | TFBS: 0 | Strand: -

LTR36 188547863-188548047 BLAT view
TFBS: 0 Strand: - Mutations: 216
0

LTR36 188548356-188548544 | TFBS: 0 | Strand: -

LTR36 188548356-188548544 BLAT view
TFBS: 0 Strand: - Mutations: 216
0

LTR36 192762574-192763009 | TFBS: 0 | Strand: +

LTR36 192762574-192763009 BLAT view
TFBS: 0 Strand: + Mutations: 129
0

LTR36 192763386-192763541 | TFBS: 0 | Strand: +

LTR36 192763386-192763541 BLAT view
TFBS: 0 Strand: + Mutations: 129
0

LTR36 210988826-210989428 | TFBS: 0 | Strand: +

LTR36 210988826-210989428 BLAT view
TFBS: 0 Strand: + Mutations: 162
0

LTR36 229190330-229190503 | TFBS: 0 | Strand: -

LTR36 229190330-229190503 BLAT view
TFBS: 0 Strand: - Mutations: 129
0

LTR36 229190810-229191257 | TFBS: 0 | Strand: -

LTR36 229190810-229191257 BLAT view
TFBS: 0 Strand: - Mutations: 129
0

LTR36 232811477-232812000 | TFBS: 0 | Strand: -

LTR36 232811477-232812000 BLAT view
TFBS: 0 Strand: - Mutations: 220
0

LTR36 248147061-248147525 | TFBS: 0 | Strand: -

LTR36 248147061-248147525 BLAT view
TFBS: 0 Strand: - Mutations: 223
0

LTR36 248180771-248181071 | TFBS: 0 | Strand: -

LTR36 248180771-248181071 BLAT view
TFBS: 0 Strand: - Mutations: 216
0

LTR36 248181097-248181229 | TFBS: 0 | Strand: -

LTR36 248181097-248181229 BLAT view
TFBS: 0 Strand: - Mutations: 236
0

LTR36 248194630-248195160 | TFBS: 0 | Strand: -

LTR36 248194630-248195160 BLAT view
TFBS: 0 Strand: - Mutations: 234
0

TFBS+