HERV genome browser

31156328

249250622

Insertions

HERV16-int 841853-841936 | TFBS: 0 | Strand: -

HERV16-int 841853-841936 BLAT view
TFBS: 0 Strand: - Mutations: 215
0

HERV16-int 1941276-1941565 | TFBS: 0 | Strand: +

HERV16-int 1941276-1941565 BLAT view
TFBS: 0 Strand: + Mutations: 320
0

HERV16-int 1941891-1942374 | TFBS: 0 | Strand: +

HERV16-int 1941891-1942374 BLAT view
TFBS: 0 Strand: + Mutations: 320
0

HERV16-int 4314699-4315815 | TFBS: 0 | Strand: +

HERV16-int 4314699-4315815 BLAT view
TFBS: 0 Strand: + Mutations: 302
0

HERV16-int 4402583-4402911 | TFBS: 0 | Strand: +

HERV16-int 4402583-4402911 BLAT view
TFBS: 0 Strand: + Mutations: 369
0

HERV16-int 6471058-6471796 | TFBS: 0 | Strand: +

HERV16-int 6471058-6471796 BLAT view
TFBS: 0 Strand: + Mutations: 268
0

HERV16-int 6472944-6473009 | TFBS: 1 | Strand: +

HERV16-int 6472944-6473009 BLAT view
TFBS: 1 Strand: + Mutations: 200
STAT3/6472984/6473234/397

HERV16-int 19897923-19898147 | TFBS: 0 | Strand: -

HERV16-int 19897923-19898147 BLAT view
TFBS: 0 Strand: - Mutations: 318
0

HERV16-int 36111806-36112095 | TFBS: 3 | Strand: +

HERV16-int 36111806-36112095 BLAT view
TFBS: 3 Strand: + Mutations: 308
CTCF/36111672/36112067/331
Rad21/36111739/36111995/158
CTCF_(SC-5916)/36111785/36111989/129

HERV16-int 38609402-38610055 | TFBS: 0 | Strand: +

HERV16-int 38609402-38610055 BLAT view
TFBS: 0 Strand: + Mutations: 296
0

HERV16-int 38616685-38616746 | TFBS: 0 | Strand: +

HERV16-int 38616685-38616746 BLAT view
TFBS: 0 Strand: + Mutations: 213
0

HERV16-int 38702342-38702663 | TFBS: 0 | Strand: -

HERV16-int 38702342-38702663 BLAT view
TFBS: 0 Strand: - Mutations: 362
0

HERV16-int 50096427-50096520 | TFBS: 0 | Strand: +

HERV16-int 50096427-50096520 BLAT view
TFBS: 0 Strand: + Mutations: 239
0

HERV16-int 50843940-50845365 | TFBS: 0 | Strand: +

HERV16-int 50843940-50845365 BLAT view
TFBS: 0 Strand: + Mutations: 321
0

HERV16-int 50851517-50852334 | TFBS: 1 | Strand: +

HERV16-int 50851517-50852334 BLAT view
TFBS: 1 Strand: + Mutations: 313
JunD/50852153/50852413/250

HERV16-int 50852720-50852866 | TFBS: 0 | Strand: +

HERV16-int 50852720-50852866 BLAT view
TFBS: 0 Strand: + Mutations: 311
0

HERV16-int 52565837-52565874 | TFBS: 0 | Strand: -

HERV16-int 52565837-52565874 BLAT view
TFBS: 0 Strand: - Mutations: 328
0

HERV16-int 52566181-52566834 | TFBS: 0 | Strand: -

HERV16-int 52566181-52566834 BLAT view
TFBS: 0 Strand: - Mutations: 279
0

HERV16-int 52568032-52568064 | TFBS: 1 | Strand: -

HERV16-int 52568032-52568064 BLAT view
TFBS: 1 Strand: - Mutations: 328
CEBPB/52568026/52568282/90

HERV16-int 52568334-52569523 | TFBS: 3 | Strand: -

HERV16-int 52568334-52569523 BLAT view
TFBS: 3 Strand: - Mutations: 311
NFKB/52568076/52568376/254
EBF1_(C-8)/52568132/52568368/114
EBF/52568134/52568398/134

HERV16-int 52569835-52569850 | TFBS: 0 | Strand: -

HERV16-int 52569835-52569850 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

HERV16-int 52570161-52570462 | TFBS: 0 | Strand: -

HERV16-int 52570161-52570462 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

HERV16-int 55875482-55875623 | TFBS: 0 | Strand: -

HERV16-int 55875482-55875623 BLAT view
TFBS: 0 Strand: - Mutations: 287
0

HERV16-int 58831557-58831695 | TFBS: 0 | Strand: +

HERV16-int 58831557-58831695 BLAT view
TFBS: 0 Strand: + Mutations: 275
0

HERV16-int 59455918-59457098 | TFBS: 0 | Strand: -

HERV16-int 59455918-59457098 BLAT view
TFBS: 0 Strand: - Mutations: 319
0

HERV16-int 61001067-61001185 | TFBS: 0 | Strand: -

HERV16-int 61001067-61001185 BLAT view
TFBS: 0 Strand: - Mutations: 271
0

HERV16-int 62074838-62076646 | TFBS: 0 | Strand: +

HERV16-int 62074838-62076646 BLAT view
TFBS: 0 Strand: + Mutations: 289
0

HERV16-int 77266597-77268350 | TFBS: 1 | Strand: +

HERV16-int 77266597-77268350 BLAT view
TFBS: 1 Strand: + Mutations: 276
p300/77267913/77268098/763

HERV16-int 77269194-77269958 | TFBS: 0 | Strand: +

HERV16-int 77269194-77269958 BLAT view
TFBS: 0 Strand: + Mutations: 292
0

HERV16-int 77269943-77270564 | TFBS: 0 | Strand: +

HERV16-int 77269943-77270564 BLAT view
TFBS: 0 Strand: + Mutations: 292
0

HERV16-int 80821148-80821707 | TFBS: 0 | Strand: +

HERV16-int 80821148-80821707 BLAT view
TFBS: 0 Strand: + Mutations: 322
0

HERV16-int 81427943-81428412 | TFBS: 0 | Strand: +

HERV16-int 81427943-81428412 BLAT view
TFBS: 0 Strand: + Mutations: 305
0

HERV16-int 81431231-81431613 | TFBS: 0 | Strand: +

HERV16-int 81431231-81431613 BLAT view
TFBS: 0 Strand: + Mutations: 297
0

HERV16-int 83672354-83673583 | TFBS: 0 | Strand: +

HERV16-int 83672354-83673583 BLAT view
TFBS: 0 Strand: + Mutations: 333
0

HERV16-int 84825720-84825987 | TFBS: 0 | Strand: -

HERV16-int 84825720-84825987 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

HERV16-int 87625102-87626262 | TFBS: 0 | Strand: +

HERV16-int 87625102-87626262 BLAT view
TFBS: 0 Strand: + Mutations: 279
0

HERV16-int 89852394-89852940 | TFBS: 0 | Strand: +

HERV16-int 89852394-89852940 BLAT view
TFBS: 0 Strand: + Mutations: 274
0

HERV16-int 95182188-95182301 | TFBS: 0 | Strand: -

HERV16-int 95182188-95182301 BLAT view
TFBS: 0 Strand: - Mutations: 310
0

HERV16-int 96132593-96132778 | TFBS: 0 | Strand: +

HERV16-int 96132593-96132778 BLAT view
TFBS: 0 Strand: + Mutations: 286
0

HERV16-int 99918336-99919067 | TFBS: 1 | Strand: +

HERV16-int 99918336-99919067 BLAT view
TFBS: 1 Strand: + Mutations: 324
JunD/99918647/99918907/220

HERV16-int 103808443-103808961 | TFBS: 0 | Strand: +

HERV16-int 103808443-103808961 BLAT view
TFBS: 0 Strand: + Mutations: 349
0

HERV16-int 103809219-103809344 | TFBS: 0 | Strand: +

HERV16-int 103809219-103809344 BLAT view
TFBS: 0 Strand: + Mutations: 258
0

HERV16-int 103809682-103809801 | TFBS: 0 | Strand: +

HERV16-int 103809682-103809801 BLAT view
TFBS: 0 Strand: + Mutations: 258
0

HERV16-int 103810048-103810308 | TFBS: 0 | Strand: +

HERV16-int 103810048-103810308 BLAT view
TFBS: 0 Strand: + Mutations: 277
0

HERV16-int 103948175-103948693 | TFBS: 0 | Strand: +

HERV16-int 103948175-103948693 BLAT view
TFBS: 0 Strand: + Mutations: 349
0

HERV16-int 103948951-103949076 | TFBS: 0 | Strand: +

HERV16-int 103948951-103949076 BLAT view
TFBS: 0 Strand: + Mutations: 258
0

HERV16-int 103949414-103949533 | TFBS: 0 | Strand: +

HERV16-int 103949414-103949533 BLAT view
TFBS: 0 Strand: + Mutations: 258
0

HERV16-int 103949780-103950040 | TFBS: 0 | Strand: +

HERV16-int 103949780-103950040 BLAT view
TFBS: 0 Strand: + Mutations: 277
0

HERV16-int 104625400-104625633 | TFBS: 0 | Strand: +

HERV16-int 104625400-104625633 BLAT view
TFBS: 0 Strand: + Mutations: 362
0

HERV16-int 104626044-104626405 | TFBS: 0 | Strand: +

HERV16-int 104626044-104626405 BLAT view
TFBS: 0 Strand: + Mutations: 345
0

HERV16-int 104626564-104626658 | TFBS: 0 | Strand: +

HERV16-int 104626564-104626658 BLAT view
TFBS: 0 Strand: + Mutations: 255
0

HERV16-int 104626705-104626960 | TFBS: 0 | Strand: +

HERV16-int 104626705-104626960 BLAT view
TFBS: 0 Strand: + Mutations: 280
0

HERV16-int 105522546-105523239 | TFBS: 1 | Strand: -

HERV16-int 105522546-105523239 BLAT view
TFBS: 1 Strand: - Mutations: 314
CTCF/105522728/105522972/100

HERV16-int 105523239-105523361 | TFBS: 0 | Strand: -

HERV16-int 105523239-105523361 BLAT view
TFBS: 0 Strand: - Mutations: 328
0

HERV16-int 105783886-105784028 | TFBS: 0 | Strand: -

HERV16-int 105783886-105784028 BLAT view
TFBS: 0 Strand: - Mutations: 357
0

HERV16-int 107265042-107265311 | TFBS: 0 | Strand: -

HERV16-int 107265042-107265311 BLAT view
TFBS: 0 Strand: - Mutations: 284
0

HERV16-int 107659601-107660119 | TFBS: 0 | Strand: +

HERV16-int 107659601-107660119 BLAT view
TFBS: 0 Strand: + Mutations: 314
0

HERV16-int 107660200-107660337 | TFBS: 0 | Strand: +

HERV16-int 107660200-107660337 BLAT view
TFBS: 0 Strand: + Mutations: 267
0

HERV16-int 107660565-107660797 | TFBS: 0 | Strand: +

HERV16-int 107660565-107660797 BLAT view
TFBS: 0 Strand: + Mutations: 349
0

HERV16-int 115788916-115790304 | TFBS: 0 | Strand: -

HERV16-int 115788916-115790304 BLAT view
TFBS: 0 Strand: - Mutations: 298
0

HERV16-int 146958374-146958515 | TFBS: 0 | Strand: -

HERV16-int 146958374-146958515 BLAT view
TFBS: 0 Strand: - Mutations: 314
0

HERV16-int 151712578-151713481 | TFBS: 8 | Strand: +

HERV16-int 151712578-151713481 BLAT view
TFBS: 8 Strand: + Mutations: 306
MafK_(ab50322)/151712453/151712717/398
FOXA1_(C-20)/151712470/151712694/225
MafK_(SC-477)/151712474/151712718/517
MafF_(M8194)/151712474/151712744/284
GATA3_(SC-268)/151712486/151712756/1000
p300/151712491/151712775/969
CTCF/151712496/151712812/413
c-Myc/151712549/151712759/453

HERV16-int 151713784-151713861 | TFBS: 0 | Strand: +

HERV16-int 151713784-151713861 BLAT view
TFBS: 0 Strand: + Mutations: 306
0

HERV16-int 151714463-151714585 | TFBS: 0 | Strand: +

HERV16-int 151714463-151714585 BLAT view
TFBS: 0 Strand: + Mutations: 306
0

HERV16-int 151714718-151715120 | TFBS: 0 | Strand: +

HERV16-int 151714718-151715120 BLAT view
TFBS: 0 Strand: + Mutations: 306
0

HERV16-int 152889795-152890190 | TFBS: 0 | Strand: -

HERV16-int 152889795-152890190 BLAT view
TFBS: 0 Strand: - Mutations: 355
0

HERV16-int 152892561-152892797 | TFBS: 0 | Strand: -

HERV16-int 152892561-152892797 BLAT view
TFBS: 0 Strand: - Mutations: 321
0

HERV16-int 152893090-152893485 | TFBS: 0 | Strand: -

HERV16-int 152893090-152893485 BLAT view
TFBS: 0 Strand: - Mutations: 322
0

HERV16-int 152893850-152894375 | TFBS: 0 | Strand: -

HERV16-int 152893850-152894375 BLAT view
TFBS: 0 Strand: - Mutations: 349
0

HERV16-int 152894760-152895297 | TFBS: 0 | Strand: -

HERV16-int 152894760-152895297 BLAT view
TFBS: 0 Strand: - Mutations: 320
0

HERV16-int 153405454-153405580 | TFBS: 0 | Strand: -

HERV16-int 153405454-153405580 BLAT view
TFBS: 0 Strand: - Mutations: 314
0

HERV16-int 153405588-153405830 | TFBS: 6 | Strand: +

HERV16-int 153405588-153405830 BLAT view
TFBS: 6 Strand: + Mutations: 372
CCNT2/153405749/153406065/757
eGFP-GATA2/153405775/153406159/460
STAT1/153405814/153406123/320
STAT2/153405818/153406102/198
GATA-1/153405824/153406274/207
Pol2/153405825/153406235/680

HERV16-int 153406428-153406679 | TFBS: 0 | Strand: +

HERV16-int 153406428-153406679 BLAT view
TFBS: 0 Strand: + Mutations: 307
0

HERV16-int 154279971-154280229 | TFBS: 0 | Strand: -

HERV16-int 154279971-154280229 BLAT view
TFBS: 0 Strand: - Mutations: 339
0

HERV16-int 165983643-165984266 | TFBS: 0 | Strand: +

HERV16-int 165983643-165984266 BLAT view
TFBS: 0 Strand: + Mutations: 338
0

HERV16-int 165984323-165984469 | TFBS: 0 | Strand: +

HERV16-int 165984323-165984469 BLAT view
TFBS: 0 Strand: + Mutations: 336
0

HERV16-int 171654128-171654203 | TFBS: 0 | Strand: -

HERV16-int 171654128-171654203 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

HERV16-int 171654515-171655134 | TFBS: 0 | Strand: -

HERV16-int 171654515-171655134 BLAT view
TFBS: 0 Strand: - Mutations: 307
0

HERV16-int 172666201-172666632 | TFBS: 0 | Strand: -

HERV16-int 172666201-172666632 BLAT view
TFBS: 0 Strand: - Mutations: 315
0

HERV16-int 173672646-173673007 | TFBS: 0 | Strand: -

HERV16-int 173672646-173673007 BLAT view
TFBS: 0 Strand: - Mutations: 256
0

HERV16-int 173673116-173673906 | TFBS: 0 | Strand: -

HERV16-int 173673116-173673906 BLAT view
TFBS: 0 Strand: - Mutations: 265
0

HERV16-int 177267609-177269780 | TFBS: 0 | Strand: -

HERV16-int 177267609-177269780 BLAT view
TFBS: 0 Strand: - Mutations: 333
0

HERV16-int 181199675-181199937 | TFBS: 0 | Strand: +

HERV16-int 181199675-181199937 BLAT view
TFBS: 0 Strand: + Mutations: 314
0

HERV16-int 181200424-181200801 | TFBS: 0 | Strand: +

HERV16-int 181200424-181200801 BLAT view
TFBS: 0 Strand: + Mutations: 283
0

HERV16-int 181201094-181201531 | TFBS: 0 | Strand: +

HERV16-int 181201094-181201531 BLAT view
TFBS: 0 Strand: + Mutations: 283
0

HERV16-int 181201616-181201724 | TFBS: 0 | Strand: +

HERV16-int 181201616-181201724 BLAT view
TFBS: 0 Strand: + Mutations: 194
0

HERV16-int 181201809-181202104 | TFBS: 1 | Strand: +

HERV16-int 181201809-181202104 BLAT view
TFBS: 1 Strand: + Mutations: 239
CTCF/181201748/181201968/235

HERV16-int 181203606-181203897 | TFBS: 0 | Strand: +

HERV16-int 181203606-181203897 BLAT view
TFBS: 0 Strand: + Mutations: 286
0

HERV16-int 189788276-189789277 | TFBS: 4 | Strand: -

HERV16-int 189788276-189789277 BLAT view
TFBS: 4 Strand: - Mutations: 313
p300/189788944/189789228/404
FOXA1_(C-20)/189788987/189789157/1000
GATA3_(SC-268)/189788992/189789101/620
ERalpha_a/189789016/189789260/96

HERV16-int 192461630-192462214 | TFBS: 0 | Strand: +

HERV16-int 192461630-192462214 BLAT view
TFBS: 0 Strand: + Mutations: 302
0

HERV16-int 194153943-194154493 | TFBS: 0 | Strand: -

HERV16-int 194153943-194154493 BLAT view
TFBS: 0 Strand: - Mutations: 354
0

HERV16-int 194155011-194155153 | TFBS: 0 | Strand: -

HERV16-int 194155011-194155153 BLAT view
TFBS: 0 Strand: - Mutations: 331
0

HERV16-int 198167571-198168213 | TFBS: 1 | Strand: -

HERV16-int 198167571-198168213 BLAT view
TFBS: 1 Strand: - Mutations: 325
AP-2alpha/198168203/198168587/262

HERV16-int 198997914-198998719 | TFBS: 0 | Strand: -

HERV16-int 198997914-198998719 BLAT view
TFBS: 0 Strand: - Mutations: 324
0

HERV16-int 199500561-199500718 | TFBS: 0 | Strand: +

HERV16-int 199500561-199500718 BLAT view
TFBS: 0 Strand: + Mutations: 323
0

HERV16-int 207388120-207388298 | TFBS: 1 | Strand: -

HERV16-int 207388120-207388298 BLAT view
TFBS: 1 Strand: - Mutations: 326
SETDB1/207387744/207388194/285

HERV16-int 207388929-207389628 | TFBS: 0 | Strand: -

HERV16-int 207388929-207389628 BLAT view
TFBS: 0 Strand: - Mutations: 326
0

HERV16-int 207389821-207390022 | TFBS: 0 | Strand: -

HERV16-int 207389821-207390022 BLAT view
TFBS: 0 Strand: - Mutations: 333
0

HERV16-int 209627530-209627578 | TFBS: 0 | Strand: -

HERV16-int 209627530-209627578 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

HERV16-int 213764684-213764980 | TFBS: 0 | Strand: -

HERV16-int 213764684-213764980 BLAT view
TFBS: 0 Strand: - Mutations: 319
0

HERV16-int 214046997-214047858 | TFBS: 0 | Strand: +

HERV16-int 214046997-214047858 BLAT view
TFBS: 0 Strand: + Mutations: 289
0

HERV16-int 214047875-214047984 | TFBS: 0 | Strand: +

HERV16-int 214047875-214047984 BLAT view
TFBS: 0 Strand: + Mutations: 278
0

HERV16-int 217423256-217423360 | TFBS: 0 | Strand: -

HERV16-int 217423256-217423360 BLAT view
TFBS: 0 Strand: - Mutations: 346
0

HERV16-int 217423407-217424450 | TFBS: 0 | Strand: -

HERV16-int 217423407-217424450 BLAT view
TFBS: 0 Strand: - Mutations: 367
0

HERV16-int 228798605-228798690 | TFBS: 0 | Strand: +

HERV16-int 228798605-228798690 BLAT view
TFBS: 0 Strand: + Mutations: 271
0

HERV16-int 230023601-230023955 | TFBS: 1 | Strand: +

HERV16-int 230023601-230023955 BLAT view
TFBS: 1 Strand: + Mutations: 323
MafK_(ab50322)/230023384/230023624/133

HERV16-int 230024160-230025104 | TFBS: 1 | Strand: +

HERV16-int 230024160-230025104 BLAT view
TFBS: 1 Strand: + Mutations: 306
TCF4/230024770/230025080/176

HERV16-int 230025196-230025643 | TFBS: 0 | Strand: +

HERV16-int 230025196-230025643 BLAT view
TFBS: 0 Strand: + Mutations: 348
0

HERV16-int 230025977-230026364 | TFBS: 0 | Strand: +

HERV16-int 230025977-230026364 BLAT view
TFBS: 0 Strand: + Mutations: 348
0

HERV16-int 230026339-230026472 | TFBS: 0 | Strand: +

HERV16-int 230026339-230026472 BLAT view
TFBS: 0 Strand: + Mutations: 293
0

HERV16-int 230675172-230676911 | TFBS: 0 | Strand: +

HERV16-int 230675172-230676911 BLAT view
TFBS: 0 Strand: + Mutations: 321
0

HERV16-int 230677507-230677639 | TFBS: 0 | Strand: +

HERV16-int 230677507-230677639 BLAT view
TFBS: 0 Strand: + Mutations: 225
0

HERV16-int 230677675-230678342 | TFBS: 1 | Strand: +

HERV16-int 230677675-230678342 BLAT view
TFBS: 1 Strand: + Mutations: 309
HDAC2_(SC-6296)/230677888/230678092/557

HERV16-int 230678637-230678926 | TFBS: 0 | Strand: +

HERV16-int 230678637-230678926 BLAT view
TFBS: 0 Strand: + Mutations: 258
0

HERV16-int 230680019-230680699 | TFBS: 1 | Strand: +

HERV16-int 230680019-230680699 BLAT view
TFBS: 1 Strand: + Mutations: 249
NF-E2/230680623/230680827/219

HERV16-int 230680714-230680893 | TFBS: 1 | Strand: +

HERV16-int 230680714-230680893 BLAT view
TFBS: 1 Strand: + Mutations: 204
NF-E2/230680623/230680827/219

HERV16-int 230680921-230681353 | TFBS: 0 | Strand: +

HERV16-int 230680921-230681353 BLAT view
TFBS: 0 Strand: + Mutations: 297
0

HERV16-int 230681351-230681650 | TFBS: 0 | Strand: +

HERV16-int 230681351-230681650 BLAT view
TFBS: 0 Strand: + Mutations: 292
0

HERV16-int 237147402-237147799 | TFBS: 0 | Strand: +

HERV16-int 237147402-237147799 BLAT view
TFBS: 0 Strand: + Mutations: 289
0

HERV16-int 244477113-244477568 | TFBS: 0 | Strand: -

HERV16-int 244477113-244477568 BLAT view
TFBS: 0 Strand: - Mutations: 283
0

HERV16-int 244477858-244478543 | TFBS: 2 | Strand: -

HERV16-int 244477858-244478543 BLAT view
TFBS: 2 Strand: - Mutations: 283
c-Fos/244478473/244478817/517
PU.1/244478540/244478740/153

HERV16-int 244479345-244480223 | TFBS: 0 | Strand: -

HERV16-int 244479345-244480223 BLAT view
TFBS: 0 Strand: - Mutations: 308
0

HERV16-int 244513284-244513619 | TFBS: 4 | Strand: -

HERV16-int 244513284-244513619 BLAT view
TFBS: 4 Strand: - Mutations: 321
GATA-2/244512955/244513291/1000
PU.1/244513426/244513642/82
BATF/244513464/244513578/415
TCF12/244513482/244513624/718

HERV16-int 244513919-244514011 | TFBS: 3 | Strand: -

HERV16-int 244513919-244514011 BLAT view
TFBS: 3 Strand: - Mutations: 321
TBP/244513864/244514134/37
PU.1/244513932/244514162/422
TAL1_(SC-12984)/244513936/244514080/207

HERV16-int 244575677-244575802 | TFBS: 0 | Strand: +

HERV16-int 244575677-244575802 BLAT view
TFBS: 0 Strand: + Mutations: 250
0

HERV16-int 244575893-244576641 | TFBS: 0 | Strand: +

HERV16-int 244575893-244576641 BLAT view
TFBS: 0 Strand: + Mutations: 286
0

TFBS+