Human LTR-retrotransposon genome browser

» Total HERV Statistics » HERV Genome Browser » TFBS dependence on HERV Divergence

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Choose repeat family:
Choose chromosome:
If you have specific coordinate input it here: or leave field blank.
31156328
0
249250622
Insertions
LTR26E 9251282-9251499 | TFBS: 0 | Strand: +
LTR26E 9251282-9251499 BLAT view
TFBS: 0   Strand: +   Mutations: 158
0
LTR26E 11111163-11111247 | TFBS: 0 | Strand: -
LTR26E 11111163-11111247 BLAT view
TFBS: 0   Strand: -   Mutations: 131
0
LTR26E 20432794-20433353 | TFBS: 1 | Strand: +
LTR26E 20432794-20433353 BLAT view
TFBS: 1   Strand: +   Mutations: 170
BRF2/20432579/20432823/309
LTR26E 38036750-38037351 | TFBS: 1 | Strand: +
LTR26E 38036750-38037351 BLAT view
TFBS: 1   Strand: +   Mutations: 153
CTCF/38037191/38037411/58
LTR26E 45920659-45921262 | TFBS: 1 | Strand: +
LTR26E 45920659-45921262 BLAT view
TFBS: 1   Strand: +   Mutations: 147
ELF1_(SC-631)/45920604/45920854/82
LTR26E 101752288-101752738 | TFBS: 0 | Strand: -
LTR26E 101752288-101752738 BLAT view
TFBS: 0   Strand: -   Mutations: 168
0
LTR26E 101752995-101753196 | TFBS: 0 | Strand: -
LTR26E 101752995-101753196 BLAT view
TFBS: 0   Strand: -   Mutations: 194
0
LTR26E 107113717-107114277 | TFBS: 0 | Strand: -
LTR26E 107113717-107114277 BLAT view
TFBS: 0   Strand: -   Mutations: 164
0
LTR26E 113412076-113412356 | TFBS: 7 | Strand: +
LTR26E 113412076-113412356 BLAT view
TFBS: 7   Strand: +   Mutations: 221
GATA-2/113411903/113412312/1000
eGFP-JunD/113412003/113412299/322
c-Jun/113412009/113412293/1000
JunD/113412012/113412302/187
c-Fos/113412037/113412267/1000
eGFP-FOS/113412040/113412290/387
eGFP-JunB/113412141/113412218/531
LTR26E 113412647-113412887 | TFBS: 0 | Strand: +
LTR26E 113412647-113412887 BLAT view
TFBS: 0   Strand: +   Mutations: 221
0
LTR26E 114582800-114583383 | TFBS: 0 | Strand: -
LTR26E 114582800-114583383 BLAT view
TFBS: 0   Strand: -   Mutations: 140
0
LTR26E 185595524-185596076 | TFBS: 0 | Strand: +
LTR26E 185595524-185596076 BLAT view
TFBS: 0   Strand: +   Mutations: 224
0
LTR26E 204038096-204038178 | TFBS: 0 | Strand: +
LTR26E 204038096-204038178 BLAT view
TFBS: 0   Strand: +   Mutations: 136
0
LTR26E 204038484-204039026 | TFBS: 0 | Strand: +
LTR26E 204038484-204039026 BLAT view
TFBS: 0   Strand: +   Mutations: 136
0
LTR26E 209332864-209333092 | TFBS: 0 | Strand: +
LTR26E 209332864-209333092 BLAT view
TFBS: 0   Strand: +   Mutations: 163
0
LTR26E 209333781-209334172 | TFBS: 0 | Strand: +
LTR26E 209333781-209334172 BLAT view
TFBS: 0   Strand: +   Mutations: 206
0
LTR26E 219547807-219548403 | TFBS: 0 | Strand: +
LTR26E 219547807-219548403 BLAT view
TFBS: 0   Strand: +   Mutations: 170
0
LTR26E 230148247-230148793 | TFBS: 0 | Strand: -
LTR26E 230148247-230148793 BLAT view
TFBS: 0   Strand: -   Mutations: 226
0
LTR26E 233666039-233666574 | TFBS: 1 | Strand: +
LTR26E 233666039-233666574 BLAT view
TFBS: 1   Strand: +   Mutations: 229
STAT3/233666485/233666769/133
LTR26E 245287755-245288330 | TFBS: 0 | Strand: +
LTR26E 245287755-245288330 BLAT view
TFBS: 0   Strand: +   Mutations: 151
0
LTR26E 248140919-248141319 | TFBS: 0 | Strand: +
LTR26E 248140919-248141319 BLAT view
TFBS: 0   Strand: +   Mutations: 316
0
LTR26E 248141547-248141654 | TFBS: 0 | Strand: +
LTR26E 248141547-248141654 BLAT view
TFBS: 0   Strand: +   Mutations: 255
0
LTR26E 248159078-248159511 | TFBS: 0 | Strand: +
LTR26E 248159078-248159511 BLAT view
TFBS: 0   Strand: +   Mutations: 286
0
LTR26E 248191047-248191177 | TFBS: 0 | Strand: +
LTR26E 248191047-248191177 BLAT view
TFBS: 0   Strand: +   Mutations: 225
0
LTR26E 248191471-248191633 | TFBS: 0 | Strand: +
LTR26E 248191471-248191633 BLAT view
TFBS: 0   Strand: +   Mutations: 234
0
LTR26E 248207691-248207823 | TFBS: 1 | Strand: +
LTR26E 248207691-248207823 BLAT view
TFBS: 1   Strand: +   Mutations: 243
JunD/248207603/248207863/351
LTR26E 248208141-248208303 | TFBS: 0 | Strand: +
LTR26E 248208141-248208303 BLAT view
TFBS: 0   Strand: +   Mutations: 249
0
TFBS+
LTR26E 20432794-20433353 | TFBS: 1 | Strand: +
LTR26E 20432794-20433353 BLAT view
TFBS: 1   Strand: +   Mutations: 170
BRF2/20432579/20432823/309
LTR26E 38036750-38037351 | TFBS: 1 | Strand: +
LTR26E 38036750-38037351 BLAT view
TFBS: 1   Strand: +   Mutations: 153
CTCF/38037191/38037411/58
LTR26E 45920659-45921262 | TFBS: 1 | Strand: +
LTR26E 45920659-45921262 BLAT view
TFBS: 1   Strand: +   Mutations: 147
ELF1_(SC-631)/45920604/45920854/82
LTR26E 113412076-113412356 | TFBS: 7 | Strand: +
LTR26E 113412076-113412356 BLAT view
TFBS: 7   Strand: +   Mutations: 221
GATA-2/113411903/113412312/1000
eGFP-JunD/113412003/113412299/322
c-Jun/113412009/113412293/1000
JunD/113412012/113412302/187
c-Fos/113412037/113412267/1000
eGFP-FOS/113412040/113412290/387
eGFP-JunB/113412141/113412218/531
LTR26E 233666039-233666574 | TFBS: 1 | Strand: +
LTR26E 233666039-233666574 BLAT view
TFBS: 1   Strand: +   Mutations: 229
STAT3/233666485/233666769/133
LTR26E 248207691-248207823 | TFBS: 1 | Strand: +
LTR26E 248207691-248207823 BLAT view
TFBS: 1   Strand: +   Mutations: 243
JunD/248207603/248207863/351

refGene Track (genes view): On Off  

Show list of browser HERVs:

© 2012 Postparser.net | Andrew Garazha & Anton Buzdin | Cellgenetics.ru