HERV genome browser

31156328

249250622

Insertions

LTR24C 241172240-241172753 | TFBS: 0 | Strand: +

LTR24C 241172240-241172753 BLAT view
TFBS: 0 Strand: + Mutations: 127
0

LTR24C 4130298-4130904 | TFBS: 1 | Strand: -

LTR24C 4130298-4130904 BLAT view
TFBS: 1 Strand: - Mutations: 131
USF-1/4130743/4130896/324

LTR24C 8326686-8327257 | TFBS: 2 | Strand: -

LTR24C 8326686-8327257 BLAT view
TFBS: 2 Strand: - Mutations: 117
GR/8326865/8327081/206
NANOG_(SC-33759)/8327080/8327199/525

LTR24C 8327399-8327429 | TFBS: 1 | Strand: -

LTR24C 8327399-8327429 BLAT view
TFBS: 1 Strand: - Mutations: 117
PU.1/8327390/8327620/161

LTR24C 9140809-9140890 | TFBS: 5 | Strand: +

LTR24C 9140809-9140890 BLAT view
TFBS: 5 Strand: + Mutations: 111
AP-2alpha/9140718/9141102/834
BAF155/9140743/9141193/570
JunD/9140759/9141049/505
c-Jun/9140804/9141100/552
AP-2gamma/9140853/9140982/813

LTR24C 9140937-9140993 | TFBS: 5 | Strand: +

LTR24C 9140937-9140993 BLAT view
TFBS: 5 Strand: + Mutations: 54
AP-2alpha/9140718/9141102/834
BAF155/9140743/9141193/570
JunD/9140759/9141049/505
c-Jun/9140804/9141100/552
AP-2gamma/9140853/9140982/813

LTR24C 10069153-10069187 | TFBS: 0 | Strand: -

LTR24C 10069153-10069187 BLAT view
TFBS: 0 Strand: - Mutations: 138
0

LTR24C 10069482-10069576 | TFBS: 0 | Strand: -

LTR24C 10069482-10069576 BLAT view
TFBS: 0 Strand: - Mutations: 138
0

LTR24C 10071078-10071602 | TFBS: 0 | Strand: -

LTR24C 10071078-10071602 BLAT view
TFBS: 0 Strand: - Mutations: 146
0

LTR24C 22297758-22297893 | TFBS: 0 | Strand: -

LTR24C 22297758-22297893 BLAT view
TFBS: 0 Strand: - Mutations: 193
0

LTR24C 22299273-22299719 | TFBS: 5 | Strand: -

LTR24C 22299273-22299719 BLAT view
TFBS: 5 Strand: - Mutations: 115
GATA-2/22299409/22299789/126
p300/22299576/22299860/156
FOXA1_(C-20)/22299578/22299736/349
FOXA1_(SC-101058)/22299583/22299694/221
FOXA2_(SC-6554)/22299634/22299858/290

LTR24C 22323434-22323571 | TFBS: 0 | Strand: -

LTR24C 22323434-22323571 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR24C 22323870-22323900 | TFBS: 0 | Strand: -

LTR24C 22323870-22323900 BLAT view
TFBS: 0 Strand: - Mutations: 139
0

LTR24C 22324198-22324642 | TFBS: 7 | Strand: -

LTR24C 22324198-22324642 BLAT view
TFBS: 7 Strand: - Mutations: 139
c-Fos/22324296/22324640/298
c-Jun/22324335/22324611/227
FOXA1_(SC-101058)/22324504/22324774/372
p300/22324505/22324789/213
FOXA1_(C-20)/22324509/22324769/425
FOXA2_(SC-6554)/22324521/22324745/202
SP1/22324540/22324820/208

LTR24C 40479543-40479597 | TFBS: 0 | Strand: -

LTR24C 40479543-40479597 BLAT view
TFBS: 0 Strand: - Mutations: 137
0

LTR24C 40479723-40480214 | TFBS: 8 | Strand: -

LTR24C 40479723-40480214 BLAT view
TFBS: 8 Strand: - Mutations: 137
c-Fos/40479852/40480196/302
eGFP-GATA2/40479889/40480273/586
GATA-2/40479896/40480187/988
c-Jun/40479926/40480202/429
GATA2_(CG2-96)/40479976/40480206/148
USF2/40480006/40480262/99
USF-1/40480006/40480256/162
USF1_(SC-8983)/40480032/40480252/59

LTR24C 40480522-40480556 | TFBS: 0 | Strand: -

LTR24C 40480522-40480556 BLAT view
TFBS: 0 Strand: - Mutations: 137
0

LTR24C 40481441-40481548 | TFBS: 0 | Strand: +

LTR24C 40481441-40481548 BLAT view
TFBS: 0 Strand: + Mutations: 143
0

LTR24C 55405392-55405980 | TFBS: 2 | Strand: -

LTR24C 55405392-55405980 BLAT view
TFBS: 2 Strand: - Mutations: 161
USF1_(SC-8983)/55405763/55405983/88
USF-1/55405798/55405981/307

LTR24C 81070071-81070710 | TFBS: 1 | Strand: -

LTR24C 81070071-81070710 BLAT view
TFBS: 1 Strand: - Mutations: 129
GATA3_(SC-268)/81070328/81070588/219

LTR24C 93848945-93849250 | TFBS: 0 | Strand: -

LTR24C 93848945-93849250 BLAT view
TFBS: 0 Strand: - Mutations: 102
0

LTR24C 101408092-101408620 | TFBS: 0 | Strand: -

LTR24C 101408092-101408620 BLAT view
TFBS: 0 Strand: - Mutations: 114
0

LTR24C 113030241-113030272 | TFBS: 0 | Strand: +

LTR24C 113030241-113030272 BLAT view
TFBS: 0 Strand: + Mutations: 32
0

LTR24C 113030964-113031166 | TFBS: 0 | Strand: +

LTR24C 113030964-113031166 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR24C 143679813-143679888 | TFBS: 0 | Strand: +

LTR24C 143679813-143679888 BLAT view
TFBS: 0 Strand: + Mutations: 131
0

LTR24C 143680200-143680299 | TFBS: 0 | Strand: +

LTR24C 143680200-143680299 BLAT view
TFBS: 0 Strand: + Mutations: 131
0

LTR24C 143680597-143680832 | TFBS: 0 | Strand: +

LTR24C 143680597-143680832 BLAT view
TFBS: 0 Strand: + Mutations: 131
0

LTR24C 143681146-143681440 | TFBS: 0 | Strand: +

LTR24C 143681146-143681440 BLAT view
TFBS: 0 Strand: + Mutations: 131
0

LTR24C 144317261-144317315 | TFBS: 0 | Strand: -

LTR24C 144317261-144317315 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144317348-144317537 | TFBS: 0 | Strand: -

LTR24C 144317348-144317537 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144317856-144318091 | TFBS: 0 | Strand: -

LTR24C 144317856-144318091 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144318401-144318509 | TFBS: 0 | Strand: -

LTR24C 144318401-144318509 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144318814-144318889 | TFBS: 0 | Strand: -

LTR24C 144318814-144318889 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144497504-144497558 | TFBS: 0 | Strand: -

LTR24C 144497504-144497558 BLAT view
TFBS: 0 Strand: - Mutations: 130
0

LTR24C 144497591-144497781 | TFBS: 0 | Strand: -

LTR24C 144497591-144497781 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR24C 144498103-144498338 | TFBS: 0 | Strand: -

LTR24C 144498103-144498338 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR24C 144498648-144498756 | TFBS: 0 | Strand: -

LTR24C 144498648-144498756 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR24C 144499061-144499136 | TFBS: 0 | Strand: -

LTR24C 144499061-144499136 BLAT view
TFBS: 0 Strand: - Mutations: 136
0

LTR24C 147867326-147867401 | TFBS: 0 | Strand: +

LTR24C 147867326-147867401 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR24C 147867713-147867812 | TFBS: 0 | Strand: +

LTR24C 147867713-147867812 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR24C 147868110-147868345 | TFBS: 0 | Strand: +

LTR24C 147868110-147868345 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR24C 147868659-147868953 | TFBS: 0 | Strand: +

LTR24C 147868659-147868953 BLAT view
TFBS: 0 Strand: + Mutations: 133
0

LTR24C 149598390-149598465 | TFBS: 0 | Strand: +

LTR24C 149598390-149598465 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR24C 149598773-149598880 | TFBS: 0 | Strand: +

LTR24C 149598773-149598880 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR24C 149599189-149599424 | TFBS: 0 | Strand: +

LTR24C 149599189-149599424 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR24C 149599746-149599937 | TFBS: 0 | Strand: +

LTR24C 149599746-149599937 BLAT view
TFBS: 0 Strand: + Mutations: 134
0

LTR24C 149599970-149600024 | TFBS: 0 | Strand: +

LTR24C 149599970-149600024 BLAT view
TFBS: 0 Strand: + Mutations: 130
0

LTR24C 168187135-168187744 | TFBS: 0 | Strand: +

LTR24C 168187135-168187744 BLAT view
TFBS: 0 Strand: + Mutations: 160
0

LTR24C 176213810-176214135 | TFBS: 0 | Strand: -

LTR24C 176213810-176214135 BLAT view
TFBS: 0 Strand: - Mutations: 189
0

LTR24C 176214136-176214276 | TFBS: 0 | Strand: -

LTR24C 176214136-176214276 BLAT view
TFBS: 0 Strand: - Mutations: 72
0

LTR24C 196492890-196493426 | TFBS: 0 | Strand: +

LTR24C 196492890-196493426 BLAT view
TFBS: 0 Strand: + Mutations: 166
0

LTR24C 212101510-212101540 | TFBS: 1 | Strand: -

LTR24C 212101510-212101540 BLAT view
TFBS: 1 Strand: - Mutations: 33
GATA-1/212101539/212101989/266

LTR24C 220094063-220094634 | TFBS: 0 | Strand: +

LTR24C 220094063-220094634 BLAT view
TFBS: 0 Strand: + Mutations: 128
0

LTR24C 226634656-226634724 | TFBS: 0 | Strand: +

LTR24C 226634656-226634724 BLAT view
TFBS: 0 Strand: + Mutations: 116
0

LTR24C 226635008-226635198 | TFBS: 1 | Strand: +

LTR24C 226635008-226635198 BLAT view
TFBS: 1 Strand: + Mutations: 116
USF-1/226634953/226635183/82

LTR24C 226635495-226635763 | TFBS: 0 | Strand: +

LTR24C 226635495-226635763 BLAT view
TFBS: 0 Strand: + Mutations: 116
0

LTR24C 226636034-226636067 | TFBS: 0 | Strand: +

LTR24C 226636034-226636067 BLAT view
TFBS: 0 Strand: + Mutations: 116
0

LTR24C 229354191-229354573 | TFBS: 0 | Strand: -

LTR24C 229354191-229354573 BLAT view
TFBS: 0 Strand: - Mutations: 120
0

LTR24C 229826730-229827054 | TFBS: 1 | Strand: -

LTR24C 229826730-229827054 BLAT view
TFBS: 1 Strand: - Mutations: 295
MafK_(ab50322)/229826485/229826749/958

LTR24C 229827124-229827230 | TFBS: 0 | Strand: -

LTR24C 229827124-229827230 BLAT view
TFBS: 0 Strand: - Mutations: 245
0

LTR24C 229951140-229951665 | TFBS: 1 | Strand: -

LTR24C 229951140-229951665 BLAT view
TFBS: 1 Strand: - Mutations: 148
USF-1/229951483/229951713/93

LTR24C 230637285-230637843 | TFBS: 4 | Strand: -

LTR24C 230637285-230637843 BLAT view
TFBS: 4 Strand: - Mutations: 118
USF2/230637606/230637870/174
USF-1/230637624/230637891/157
GATA3_(SC-268)/230637626/230637886/497
FOXA1_(C-20)/230637751/230637975/310

LTR24C 236061925-236062272 | TFBS: 0 | Strand: +

LTR24C 236061925-236062272 BLAT view
TFBS: 0 Strand: + Mutations: 125
0

LTR24C 236062578-236062717 | TFBS: 0 | Strand: +

LTR24C 236062578-236062717 BLAT view
TFBS: 0 Strand: + Mutations: 266
0

LTR24C 238830580-238831181 | TFBS: 0 | Strand: +

LTR24C 238830580-238831181 BLAT view
TFBS: 0 Strand: + Mutations: 185
0

LTR24C 241171862-241171930 | TFBS: 0 | Strand: +

LTR24C 241171862-241171930 BLAT view
TFBS: 0 Strand: + Mutations: 127
0

LTR24C 241277992-241278585 | TFBS: 2 | Strand: +

LTR24C 241277992-241278585 BLAT view
TFBS: 2 Strand: + Mutations: 93
USF-1/241278017/241278152/365
MafK_(ab50322)/241278325/241278565/121

LTR24C 242129655-242129692 | TFBS: 0 | Strand: +

LTR24C 242129655-242129692 BLAT view
TFBS: 0 Strand: + Mutations: 162
0

TFBS+