Human LTR-retrotransposon TFBS information

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Please choose TFBS: select TFBSAP-2alpha / 1154AP-2gamma / 1750ATF3 / 676BAF155 / 424BAF170 / 105BATF / 2943BCL11A / 1857BCL3 / 814BCLAF1_(M33-P5B11) / 294BDP1 / 46BHLHE40 / 237BRCA1_(C-1863) / 244BRF1 / 7BRF2 / 112Brg1 / 332c-Fos / 6019c-Jun / 5332c-Myc / 2382CCNT2 / 1193CEBPB / 9580CHD2_(N-1250) / 1363CtBP2 / 99CTCF / 16446CTCFL_(SC-98982) / 942CTCF_(C-20) / 3729CTCF_(SC-5916) / 5879E2F1 / 28E2F4 / 108E2F6 / 612E2F6_(H-50) / 1669EBF / 3054EBF1_(C-8) / 2755eGFP-FOS / 1005eGFP-GATA2 / 1602eGFP-HDAC8 / 82eGFP-JunB / 1378eGFP-JunD / 2879eGFP-NR4A1 / 40Egr-1 / 2055ELF1_(SC-631) / 3338ELK4 / 224ERalpha_a / 2637ERRA / 47ETS1 / 362FOSL1_(SC-183) / 1042FOSL2 / 1989FOXA1_(C-20) / 7059FOXA1_(SC-101058) / 3643FOXA2_(SC-6554) / 3371GABP / 1371GATA-1 / 4072GATA-2 / 7539GATA2_(CG2-96) / 2649GATA3_(SC-268) / 3493GCN5 / 4GR / 2342GRp20 / 2GTF2B / 174GTF2F1_(RAP-74) / 591HA-E2F1 / 825HDAC2_(SC-6296) / 2171HEY1 / 2102HMGN3 / 381HNF4A / 716HNF4A_(H-171) / 2530HNF4G_(SC-6558) / 1744HSF1 / 57Ini1 / 281IRF1 / 822IRF3 / 83IRF4_(M-17) / 1548JunD / 5891KAP1 / 6072MafF_(M8194) / 3357MafK_(ab50322) / 7117MafK_(SC-477) / 3758Max / 3260MEF2A / 1338MEF2C_(SC-13268) / 504Mxi1_(bHLH) / 602NANOG_(SC-33759) / 1538NELFe / 24NF-E2 / 255NF-E2_(H-230) / 121NF-YA / 4712NF-YB / 4475NFKB / 3382Nrf1 / 145NRSF / 2460Oct-2 / 1302p300 / 6874p300_(F-4) / 490p300_(N-15) / 2104PAX5-C20 / 1839PAX5-N19 / 1327Pbx3 / 620PGC1A / 38Pol2 / 6936Pol2(b) / 1163Pol2(phosphoS2) / 245Pol2-4H8 / 5620Pol3 / 1POU2F2 / 1299POU5F1_(SC-9081) / 857PRDM1_(Val90) / 397PU.1 / 8228Rad21 / 8628RFX5_(N-494) / 1338RPC155 / 279RXRA / 1518SETDB1 / 9606Sin3Ak-20 / 589SIRT6 / 340SIX5 / 976SMC3_(ab9263) / 3412SP1 / 4207SP2_(SC-643) / 124SPT20 / 13SREBP1 / 91SREBP2 / 21SRF / 2713STAT1 / 2172STAT2 / 433STAT3 / 7221SUZ12 / 94TAF1 / 2050TAF7_(SQ-8) / 565TAL1_(SC-12984) / 4758TBP / 3380TCF12 / 2192TCF4 / 2583TFIIIC-110 / 170THAP1_(SC-98174) / 62TR4 / 187USF-1 / 11993USF1_(SC-8983) / 3934USF2 / 4077WHIP / 53XRCC4 / 1YY1 / 3555YY1_(C-20) / 3940ZBTB33 / 680ZBTB7A_(SC-34508) / 707ZEB1_(SC-25388) / 322Znf143_(16618-1-AP) / 1152ZNF263 / 2025ZNF274 / 205ZZZ3 / 157

or

Divergence Range	TFBS in range
280	312
100	88
160	218
120	115
180	207
200	274
220	282
260	293
60	25
240	269
140	186
300	235
80	57

* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.

© 2012 Postparser.net | Andrew Garazha & Anton Buzdin | Cellgenetics.ru