Human LTR-retrotransposon TFBS information

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Please choose TFBS: select TFBSAP-2alpha / 1154AP-2gamma / 1750ATF3 / 676BAF155 / 424BAF170 / 105BATF / 2943BCL11A / 1857BCL3 / 814BCLAF1_(M33-P5B11) / 294BDP1 / 46BHLHE40 / 237BRCA1_(C-1863) / 244BRF1 / 7BRF2 / 112Brg1 / 332c-Fos / 6019c-Jun / 5332c-Myc / 2382CCNT2 / 1193CEBPB / 9580CHD2_(N-1250) / 1363CtBP2 / 99CTCF / 16446CTCFL_(SC-98982) / 942CTCF_(C-20) / 3729CTCF_(SC-5916) / 5879E2F1 / 28E2F4 / 108E2F6 / 612E2F6_(H-50) / 1669EBF / 3054EBF1_(C-8) / 2755eGFP-FOS / 1005eGFP-GATA2 / 1602eGFP-HDAC8 / 82eGFP-JunB / 1378eGFP-JunD / 2879eGFP-NR4A1 / 40Egr-1 / 2055ELF1_(SC-631) / 3338ELK4 / 224ERalpha_a / 2637ERRA / 47ETS1 / 362FOSL1_(SC-183) / 1042FOSL2 / 1989FOXA1_(C-20) / 7059FOXA1_(SC-101058) / 3643FOXA2_(SC-6554) / 3371GABP / 1371GATA-1 / 4072GATA-2 / 7539GATA2_(CG2-96) / 2649GATA3_(SC-268) / 3493GCN5 / 4GR / 2342GRp20 / 2GTF2B / 174GTF2F1_(RAP-74) / 591HA-E2F1 / 825HDAC2_(SC-6296) / 2171HEY1 / 2102HMGN3 / 381HNF4A / 716HNF4A_(H-171) / 2530HNF4G_(SC-6558) / 1744HSF1 / 57Ini1 / 281IRF1 / 822IRF3 / 83IRF4_(M-17) / 1548JunD / 5891KAP1 / 6072MafF_(M8194) / 3357MafK_(ab50322) / 7117MafK_(SC-477) / 3758Max / 3260MEF2A / 1338MEF2C_(SC-13268) / 504Mxi1_(bHLH) / 602NANOG_(SC-33759) / 1538NELFe / 24NF-E2 / 255NF-E2_(H-230) / 121NF-YA / 4712NF-YB / 4475NFKB / 3382Nrf1 / 145NRSF / 2460Oct-2 / 1302p300 / 6874p300_(F-4) / 490p300_(N-15) / 2104PAX5-C20 / 1839PAX5-N19 / 1327Pbx3 / 620PGC1A / 38Pol2 / 6936Pol2(b) / 1163Pol2(phosphoS2) / 245Pol2-4H8 / 5620Pol3 / 1POU2F2 / 1299POU5F1_(SC-9081) / 857PRDM1_(Val90) / 397PU.1 / 8228Rad21 / 8628RFX5_(N-494) / 1338RPC155 / 279RXRA / 1518SETDB1 / 9606Sin3Ak-20 / 589SIRT6 / 340SIX5 / 976SMC3_(ab9263) / 3412SP1 / 4207SP2_(SC-643) / 124SPT20 / 13SREBP1 / 91SREBP2 / 21SRF / 2713STAT1 / 2172STAT2 / 433STAT3 / 7221SUZ12 / 94TAF1 / 2050TAF7_(SQ-8) / 565TAL1_(SC-12984) / 4758TBP / 3380TCF12 / 2192TCF4 / 2583TFIIIC-110 / 170THAP1_(SC-98174) / 62TR4 / 187USF-1 / 11993USF1_(SC-8983) / 3934USF2 / 4077WHIP / 53XRCC4 / 1YY1 / 3555YY1_(C-20) / 3940ZBTB33 / 680ZBTB7A_(SC-34508) / 707ZEB1_(SC-25388) / 322Znf143_(16618-1-AP) / 1152ZNF263 / 2025ZNF274 / 205ZZZ3 / 157

or

Divergence Range	TFBS in range
80	40
60	29
280	276
220	252
240	235
260	262
200	228
120	194
100	109
180	239
300	242
160	316
140	302

* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.

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