Human LTR-retrotransposon TFBS information
Please choose TFBS:
select TFBS AP-2alpha / 1154 AP-2gamma / 1750 ATF3 / 676 BAF155 / 424 BAF170 / 105 BATF / 2943 BCL11A / 1857 BCL3 / 814 BCLAF1_(M33-P5B11) / 294 BDP1 / 46 BHLHE40 / 237 BRCA1_(C-1863) / 244 BRF1 / 7 BRF2 / 112 Brg1 / 332 c-Fos / 6019 c-Jun / 5332 c-Myc / 2382 CCNT2 / 1193 CEBPB / 9580 CHD2_(N-1250) / 1363 CtBP2 / 99 CTCF / 16446 CTCFL_(SC-98982) / 942 CTCF_(C-20) / 3729 CTCF_(SC-5916) / 5879 E2F1 / 28 E2F4 / 108 E2F6 / 612 E2F6_(H-50) / 1669 EBF / 3054 EBF1_(C-8) / 2755 eGFP-FOS / 1005 eGFP-GATA2 / 1602 eGFP-HDAC8 / 82 eGFP-JunB / 1378 eGFP-JunD / 2879 eGFP-NR4A1 / 40 Egr-1 / 2055 ELF1_(SC-631) / 3338 ELK4 / 224 ERalpha_a / 2637 ERRA / 47 ETS1 / 362 FOSL1_(SC-183) / 1042 FOSL2 / 1989 FOXA1_(C-20) / 7059 FOXA1_(SC-101058) / 3643 FOXA2_(SC-6554) / 3371 GABP / 1371 GATA-1 / 4072 GATA-2 / 7539 GATA2_(CG2-96) / 2649 GATA3_(SC-268) / 3493 GCN5 / 4 GR / 2342 GRp20 / 2 GTF2B / 174 GTF2F1_(RAP-74) / 591 HA-E2F1 / 825 HDAC2_(SC-6296) / 2171 HEY1 / 2102 HMGN3 / 381 HNF4A / 716 HNF4A_(H-171) / 2530 HNF4G_(SC-6558) / 1744 HSF1 / 57 Ini1 / 281 IRF1 / 822 IRF3 / 83 IRF4_(M-17) / 1548 JunD / 5891 KAP1 / 6072 MafF_(M8194) / 3357 MafK_(ab50322) / 7117 MafK_(SC-477) / 3758 Max / 3260 MEF2A / 1338 MEF2C_(SC-13268) / 504 Mxi1_(bHLH) / 602 NANOG_(SC-33759) / 1538 NELFe / 24 NF-E2 / 255 NF-E2_(H-230) / 121 NF-YA / 4712 NF-YB / 4475 NFKB / 3382 Nrf1 / 145 NRSF / 2460 Oct-2 / 1302 p300 / 6874 p300_(F-4) / 490 p300_(N-15) / 2104 PAX5-C20 / 1839 PAX5-N19 / 1327 Pbx3 / 620 PGC1A / 38 Pol2 / 6936 Pol2(b) / 1163 Pol2(phosphoS2) / 245 Pol2-4H8 / 5620 Pol3 / 1 POU2F2 / 1299 POU5F1_(SC-9081) / 857 PRDM1_(Val90) / 397 PU.1 / 8228 Rad21 / 8628 RFX5_(N-494) / 1338 RPC155 / 279 RXRA / 1518 SETDB1 / 9606 Sin3Ak-20 / 589 SIRT6 / 340 SIX5 / 976 SMC3_(ab9263) / 3412 SP1 / 4207 SP2_(SC-643) / 124 SPT20 / 13 SREBP1 / 91 SREBP2 / 21 SRF / 2713 STAT1 / 2172 STAT2 / 433 STAT3 / 7221 SUZ12 / 94 TAF1 / 2050 TAF7_(SQ-8) / 565 TAL1_(SC-12984) / 4758 TBP / 3380 TCF12 / 2192 TCF4 / 2583 TFIIIC-110 / 170 THAP1_(SC-98174) / 62 TR4 / 187 USF-1 / 11993 USF1_(SC-8983) / 3934 USF2 / 4077 WHIP / 53 XRCC4 / 1 YY1 / 3555 YY1_(C-20) / 3940 ZBTB33 / 680 ZBTB7A_(SC-34508) / 707 ZEB1_(SC-25388) / 322 Znf143_(16618-1-AP) / 1152 ZNF263 / 2025 ZNF274 / 205 ZZZ3 / 157
or
Approximation index (TFBS_norma_1) = -2.8 Approximation index (TFBS_norma_2) = -2.58
Divergence Range TFBS in range 180 128 200 116 220 157 300 113 160 173 140 148 260 165 280 139 240 160 120 90 100 77 80 62 60 24
* TFBS_total - an absolute number of current type TFBS in specific divergence range.
* TFBS_norma_1 is a ratio of TFBS_total to sum of repeats with any TFBS in specific divergence range.
* TFBS_norma_2 is a ratio of TFBS_total to sum of any repeats in specific divergence range.
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