Human LTR-retrotransposon genome browser

» Total HERV Statistics » HERV Genome Browser » TFBS dependence on HERV Divergence

» TNT/TFBS+ in HERVs » Overall TFBS Statistics » HERV Families TFBS Statistics » TFBS Types Statistics

Choose repeat family:
Choose chromosome:
If you have specific coordinate input it here: or leave field blank.
31156328
0
249250622
Insertions
LTR72 117578715-117579238 | TFBS: 6 | Strand: +
LTR72 117578715-117579238 BLAT view
TFBS: 6   Strand: +   Mutations: 138
PU.1/117578591/117578791/185
CTCF/117578767/117579137/281
c-Myc/117578829/117579039/214
USF-1/117578832/117579102/223
CTCFL_(SC-98982)/117578880/117579040/726
ZBTB7A_(SC-34508)/117578883/117579093/259
LTR72 173965557-173966071 | TFBS: 0 | Strand: +
LTR72 173965557-173966071 BLAT view
TFBS: 0   Strand: +   Mutations: 135
0
LTR72 191669998-191670507 | TFBS: 0 | Strand: +
LTR72 191669998-191670507 BLAT view
TFBS: 0   Strand: +   Mutations: 169
0
LTR72 192959912-192960165 | TFBS: 0 | Strand: -
LTR72 192959912-192960165 BLAT view
TFBS: 0   Strand: -   Mutations: 161
0
LTR72 192961236-192961381 | TFBS: 0 | Strand: -
LTR72 192961236-192961381 BLAT view
TFBS: 0   Strand: -   Mutations: 186
0
LTR72 200244707-200244777 | TFBS: 9 | Strand: -
LTR72 200244707-200244777 BLAT view
TFBS: 9   Strand: -   Mutations: 123
eGFP-GATA2/200244467/200244851/297
PU.1/200244575/200244775/186
GATA-1/200244594/200245044/260
SP1/200244648/200244928/296
FOXA1_(C-20)/200244668/200244871/480
HNF4A_(H-171)/200244670/200244910/247
FOXA1_(SC-101058)/200244703/200244852/530
FOXA2_(SC-6554)/200244718/200244835/313
p300/200244750/200244868/391
LTR72 222270850-222271342 | TFBS: 1 | Strand: -
LTR72 222270850-222271342 BLAT view
TFBS: 1   Strand: -   Mutations: 126
JunD/222270958/222271218/356
LTR72 223701422-223701921 | TFBS: 2 | Strand: +
LTR72 223701422-223701921 BLAT view
TFBS: 2   Strand: +   Mutations: 182
SETDB1/223701093/223701543/371
ZNF263/223701507/223701957/207
LTR72 233588417-233588828 | TFBS: 0 | Strand: +
LTR72 233588417-233588828 BLAT view
TFBS: 0   Strand: +   Mutations: 142
0
LTR72 233589646-233589682 | TFBS: 0 | Strand: +
LTR72 233589646-233589682 BLAT view
TFBS: 0   Strand: +   Mutations: 145
0
LTR72 233589845-233589930 | TFBS: 0 | Strand: +
LTR72 233589845-233589930 BLAT view
TFBS: 0   Strand: +   Mutations: 145
0
LTR72 247033865-247033904 | TFBS: 0 | Strand: +
LTR72 247033865-247033904 BLAT view
TFBS: 0   Strand: +   Mutations: 51
0
LTR72 247038190-247038558 | TFBS: 0 | Strand: +
LTR72 247038190-247038558 BLAT view
TFBS: 0   Strand: +   Mutations: 185
0
LTR72 247038551-247038735 | TFBS: 1 | Strand: +
LTR72 247038551-247038735 BLAT view
TFBS: 1   Strand: +   Mutations: 147
BATF/247038715/247038884/585
TFBS+
LTR72 117578715-117579238 | TFBS: 6 | Strand: +
LTR72 117578715-117579238 BLAT view
TFBS: 6   Strand: +   Mutations: 138
PU.1/117578591/117578791/185
CTCF/117578767/117579137/281
c-Myc/117578829/117579039/214
USF-1/117578832/117579102/223
CTCFL_(SC-98982)/117578880/117579040/726
ZBTB7A_(SC-34508)/117578883/117579093/259
LTR72 200244707-200244777 | TFBS: 9 | Strand: -
LTR72 200244707-200244777 BLAT view
TFBS: 9   Strand: -   Mutations: 123
eGFP-GATA2/200244467/200244851/297
PU.1/200244575/200244775/186
GATA-1/200244594/200245044/260
SP1/200244648/200244928/296
FOXA1_(C-20)/200244668/200244871/480
HNF4A_(H-171)/200244670/200244910/247
FOXA1_(SC-101058)/200244703/200244852/530
FOXA2_(SC-6554)/200244718/200244835/313
p300/200244750/200244868/391
LTR72 222270850-222271342 | TFBS: 1 | Strand: -
LTR72 222270850-222271342 BLAT view
TFBS: 1   Strand: -   Mutations: 126
JunD/222270958/222271218/356
LTR72 223701422-223701921 | TFBS: 2 | Strand: +
LTR72 223701422-223701921 BLAT view
TFBS: 2   Strand: +   Mutations: 182
SETDB1/223701093/223701543/371
ZNF263/223701507/223701957/207
LTR72 247038551-247038735 | TFBS: 1 | Strand: +
LTR72 247038551-247038735 BLAT view
TFBS: 1   Strand: +   Mutations: 147
BATF/247038715/247038884/585

refGene Track (genes view): On Off  

Show list of browser HERVs:

© 2012 Postparser.net | Andrew Garazha & Anton Buzdin | Cellgenetics.ru