HERV genome browser

31156328

249250622

Insertions

LTR18B 1920581-1920898 | TFBS: 1 | Strand: +

LTR18B 1920581-1920898 BLAT view
TFBS: 1 Strand: + Mutations: 137
Egr-1/1920753/1920969/129

LTR18B 45731754-45732258 | TFBS: 19 | Strand: -

LTR18B 45731754-45732258 BLAT view
TFBS: 19 Strand: - Mutations: 118
KAP1/45731911/45732565/1000
Egr-1/45731945/45732161/148
Pol2-4H8/45731992/45732236/252
TAL1_(SC-12984)/45732017/45732267/82
FOSL1_(SC-183)/45732036/45732252/199
JunD/45732052/45732342/272
c-Jun/45732054/45732348/467
p300_(N-15)/45732056/45732340/274
c-Fos/45732060/45732404/633
p300/45732062/45732346/292
MafF_(M8194)/45732069/45732339/293
eGFP-JunD/45732071/45732367/271
MafK_(ab50322)/45732079/45732319/527
MafK_(SC-477)/45732080/45732324/524
FOSL2/45732087/45732323/369
FOXA1_(C-20)/45732090/45732321/751
FOXA1_(SC-101058)/45732104/45732307/806
FOXA2_(SC-6554)/45732113/45732303/668
NF-E2/45732155/45732206/596

LTR18B 55988056-55988642 | TFBS: 0 | Strand: +

LTR18B 55988056-55988642 BLAT view
TFBS: 0 Strand: + Mutations: 167
0

LTR18B 66038363-66038982 | TFBS: 2 | Strand: -

LTR18B 66038363-66038982 BLAT view
TFBS: 2 Strand: - Mutations: 157
MafK_(ab50322)/66038798/66039062/156
TAL1_(SC-12984)/66038803/66039053/96

LTR18B 68403318-68403920 | TFBS: 1 | Strand: -

LTR18B 68403318-68403920 BLAT view
TFBS: 1 Strand: - Mutations: 148
Egr-1/68403410/68403626/143

LTR18B 74862683-74862751 | TFBS: 0 | Strand: +

LTR18B 74862683-74862751 BLAT view
TFBS: 0 Strand: + Mutations: 118
0

LTR18B 85745093-85745641 | TFBS: 1 | Strand: -

LTR18B 85745093-85745641 BLAT view
TFBS: 1 Strand: - Mutations: 119
BAF155/85744766/85745216/572

LTR18B 89519247-89519319 | TFBS: 0 | Strand: -

LTR18B 89519247-89519319 BLAT view
TFBS: 0 Strand: - Mutations: 186
0

LTR18B 89890757-89891325 | TFBS: 0 | Strand: +

LTR18B 89890757-89891325 BLAT view
TFBS: 0 Strand: + Mutations: 167
0

LTR18B 93877263-93877632 | TFBS: 0 | Strand: -

LTR18B 93877263-93877632 BLAT view
TFBS: 0 Strand: - Mutations: 157
0

LTR18B 93877920-93878095 | TFBS: 0 | Strand: -

LTR18B 93877920-93878095 BLAT view
TFBS: 0 Strand: - Mutations: 157
0

LTR18B 105680097-105680310 | TFBS: 4 | Strand: -

LTR18B 105680097-105680310 BLAT view
TFBS: 4 Strand: - Mutations: 252
CTCF/105680058/105680438/1000
Rad21/105680113/105680353/483
CTCF_(C-20)/105680151/105680351/319
CTCF_(SC-5916)/105680197/105680280/342

LTR18B 105681162-105681689 | TFBS: 2 | Strand: +

LTR18B 105681162-105681689 BLAT view
TFBS: 2 Strand: + Mutations: 220
SRF/105681233/105681404/558
CEBPB/105681257/105681344/545

LTR18B 147189276-147189837 | TFBS: 18 | Strand: +

LTR18B 147189276-147189837 BLAT view
TFBS: 18 Strand: + Mutations: 157
GATA-2/147189063/147189443/145
TBP/147189098/147189398/60
GATA3_(SC-268)/147189126/147189427/1000
ERalpha_a/147189142/147189472/227
c-Jun/147189161/147189457/258
p300_(N-15)/147189164/147189448/260
JunD/147189167/147189478/503
TCF4/147189175/147189485/140
c-Fos/147189183/147189527/233
STAT3/147189187/147189529/305
HA-E2F1/147189205/147189547/858
FOXA1_(SC-101058)/147189211/147189481/205
Pol2-4H8/147189212/147189476/179
p300/147189227/147189518/458
FOSL2/147189240/147189444/953
CEBPB/147189249/147189493/190
FOXA1_(C-20)/147189301/147189561/813
c-Myc/147189380/147189590/306

LTR18B 147191255-147191810 | TFBS: 6 | Strand: +

LTR18B 147191255-147191810 BLAT view
TFBS: 6 Strand: + Mutations: 157
KAP1/147191093/147191543/1000
SETDB1/147191120/147191570/511
FOSL2/147191180/147191416/160
MafF_(M8194)/147191184/147191454/306
MafK_(SC-477)/147191211/147191455/696
MafK_(ab50322)/147191301/147191369/402

LTR18B 147317197-147317727 | TFBS: 0 | Strand: +

LTR18B 147317197-147317727 BLAT view
TFBS: 0 Strand: + Mutations: 143
0

LTR18B 171585904-171586432 | TFBS: 0 | Strand: +

LTR18B 171585904-171586432 BLAT view
TFBS: 0 Strand: + Mutations: 146
0

LTR18B 186048217-186048256 | TFBS: 0 | Strand: -

LTR18B 186048217-186048256 BLAT view
TFBS: 0 Strand: - Mutations: 105
0

LTR18B 186048256-186048527 | TFBS: 0 | Strand: -

LTR18B 186048256-186048527 BLAT view
TFBS: 0 Strand: - Mutations: 135
0

LTR18B 186048556-186048754 | TFBS: 0 | Strand: -

LTR18B 186048556-186048754 BLAT view
TFBS: 0 Strand: - Mutations: 135
0

LTR18B 187425711-187426234 | TFBS: 0 | Strand: -

LTR18B 187425711-187426234 BLAT view
TFBS: 0 Strand: - Mutations: 161
0

LTR18B 191577527-191578089 | TFBS: 1 | Strand: +

LTR18B 191577527-191578089 BLAT view
TFBS: 1 Strand: + Mutations: 268
FOSL2/191577486/191577722/179

LTR18B 207594226-207594799 | TFBS: 0 | Strand: -

LTR18B 207594226-207594799 BLAT view
TFBS: 0 Strand: - Mutations: 142
0

LTR18B 207598474-207598983 | TFBS: 3 | Strand: -

LTR18B 207598474-207598983 BLAT view
TFBS: 3 Strand: - Mutations: 126
EBF/207598290/207598554/175
EBF1_(C-8)/207598312/207598488/342
Egr-1/207598318/207598494/313

LTR18B 235752332-235752893 | TFBS: 8 | Strand: +

LTR18B 235752332-235752893 BLAT view
TFBS: 8 Strand: + Mutations: 145
E2F6/235752157/235752461/119
KAP1/235752161/235752818/1000
eGFP-JunD/235752163/235752459/383
SETDB1/235752173/235752623/423
YY1/235752214/235752418/110
MafK_(ab50322)/235752240/235752504/345
NF-E2/235752267/235752471/247
eGFP-JunD/235752611/235752907/226

LTR18B 244045696-244046146 | TFBS: 1 | Strand: +

LTR18B 244045696-244046146 BLAT view
TFBS: 1 Strand: + Mutations: 130
NF-E2/244045655/244045859/325

LTR18B 246273633-246274151 | TFBS: 17 | Strand: -

LTR18B 246273633-246274151 BLAT view
TFBS: 17 Strand: - Mutations: 176
Pol2/246273686/246274096/745
Mxi1_(bHLH)/246273790/246274046/269
KAP1/246273799/246274249/687
SETDB1/246273830/246274280/237
TAF1/246273841/246274091/190
Pol2-4H8/246273850/246274094/204
TAL1_(SC-12984)/246273881/246274131/63
CEBPB/246273911/246274167/112
eGFP-JunB/246273923/246274213/438
c-Jun/246273950/246274214/276
YY1/246273950/246274230/464
eGFP-NR4A1/246273957/246274287/530
eGFP-FOS/246273969/246274219/652
YY1_(C-20)/246273977/246274241/74
eGFP-JunD/246273995/246274201/1000
NF-E2/246274009/246274099/930
MafK_(ab50322)/246274019/246274125/596

LTR18B 249076610-249077152 | TFBS: 0 | Strand: +

LTR18B 249076610-249077152 BLAT view
TFBS: 0 Strand: + Mutations: 150
0

TFBS+